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Aliases for FAM90A5P Gene

Aliases for FAM90A5P Gene

  • Family With Sequence Similarity 90, Member A5, Pseudogene 2
  • FAM90A5 3 4 6
  • Family With Sequence Similarity 90, Member A5 2
  • Putative Protein FAM90A5 3

External Ids for FAM90A5P Gene

Previous Symbols for FAM90A5P Gene

  • FAM90A5

Summaries for FAM90A5P Gene

Entrez Gene Summary for FAM90A5P Gene

  • FAM90A5 belongs to subfamily II of the primate-specific FAM90A gene family, which originated from multiple duplications and rearrangements (Bosch et al., 2007 [PubMed 17684299]). For background information on the FAM90A gene family, as well as information on the evolution of FAM90A genes, see FAM90A1 (MIM 613041).[supplied by OMIM, May 2010]

GeneCards Summary for FAM90A5P Gene

FAM90A5P (Family With Sequence Similarity 90, Member A5, Pseudogene) is a Pseudogene. GO annotations related to this gene include nucleic acid binding.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM90A5P Gene

Genomics for FAM90A5P Gene

Genomic Location for FAM90A5P Gene

Start:
7,285,732 bp from pter
End:
7,290,964 bp from pter
Size:
5,233 bases
Orientation:
Plus strand

Genomic View for FAM90A5P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM90A5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM90A5P Gene

No data available for Regulatory Elements for FAM90A5P Gene

Proteins for FAM90A5P Gene

  • Protein details for FAM90A5P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MXJ8-F90A5_HUMAN
    Recommended name:
    Putative protein FAM90A5P
    Protein Accession:
    A8MXJ8
    Secondary Accessions:

    Protein attributes for FAM90A5P Gene

    Size:
    464 amino acids
    Molecular mass:
    49840 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM90A5P Gene

Proteomics data for FAM90A5P Gene at MOPED

Post-translational modifications for FAM90A5P Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for FAM90A5P Gene

Domains for FAM90A5P Gene

Protein Domains for FAM90A5P Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

A8MXJ8

UniProtKB/Swiss-Prot:

F90A5_HUMAN
Family:
  • Belongs to the FAM90 family.:
    • A8MXJ8
genes like me logo Genes that share domains with FAM90A5P: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for FAM90A5P Gene

Function for FAM90A5P Gene

Gene Ontology (GO) - Molecular Function for FAM90A5P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0008270 zinc ion binding IEA --
genes like me logo Genes that share ontologies with FAM90A5P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM90A5P Gene

Localization for FAM90A5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM90A5P Gene

Pathways for FAM90A5P Gene

SuperPathways for FAM90A5P Gene

No Data Available

Interacting Proteins for FAM90A5P Gene

Gene Ontology (GO) - Biological Process for FAM90A5P Gene

None

No data available for Pathways by source for FAM90A5P Gene

Transcripts for FAM90A5P Gene

mRNA/cDNA for FAM90A5P Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM90A5P Gene

No ASD Table

Relevant External Links for FAM90A5P Gene

GeneLoc Exon Structure for
FAM90A5P
ECgene alternative splicing isoforms for
FAM90A5P

Expression for FAM90A5P Gene

mRNA expression in normal human tissues for FAM90A5P Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM90A5P Gene

genes like me logo Genes that share expressions with FAM90A5P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM90A5P Gene

Orthologs for FAM90A5P Gene

Evolution for FAM90A5P Gene

ENSEMBL:
Gene Tree for FAM90A5P (if available)
TreeFam:
Gene Tree for FAM90A5P (if available)

No data available for Orthologs for FAM90A5P Gene

Paralogs for FAM90A5P Gene

genes like me logo Genes that share paralogs with FAM90A5P: view

No data available for Paralogs for FAM90A5P Gene

Variants for FAM90A5P Gene

Relevant External Links for FAM90A5P Gene

HapMap Linkage Disequilibrium report
FAM90A5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for FAM90A5P Gene

Disorders for FAM90A5P Gene

No disorders were found for FAM90A5P Gene.

No data available for UniProtKB/Swiss-Prot for FAM90A5P Gene

Publications for FAM90A5P Gene

  1. Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events. (PMID: 17684299) Bosch N. … Estivill X. (Hum. Mol. Genet. 2007) 3
  2. Analysis of the multi-copy gene family FAM90A as a copy number variant in different ethnic backgrounds. (PMID: 18602769) Bosch N. … Estivill X. (Gene 2008) 3
  3. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4

Products for FAM90A5P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM90A5P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM90A5P
    • Block miRNA regulation of FAM90A5P using miScript Target Protectors

    Sources for FAM90A5P Gene

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