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Aliases for FAM90A25P Gene

Aliases for FAM90A25P Gene

  • Family With Sequence Similarity 90, Member A25, Pseudogene 2
  • Family With Sequence Similarity 90, Member A7 Pseudogene 3

External Ids for FAM90A25P Gene

Summaries for FAM90A25P Gene

GeneCards Summary for FAM90A25P Gene

FAM90A25P (Family With Sequence Similarity 90, Member A25, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM90A25P Gene

Genomics for FAM90A25P Gene

Genomic Location for FAM90A25P Gene

Start:
12,414,521 bp from pter
End:
12,418,090 bp from pter
Size:
3,570 bases
Orientation:
Minus strand

Genomic View for FAM90A25P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM90A25P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM90A25P Gene

No data available for Regulatory Elements for FAM90A25P Gene

Proteins for FAM90A25P Gene

Post-translational modifications for FAM90A25P Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM90A25P Gene

Domains for FAM90A25P Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FAM90A25P Gene

Function for FAM90A25P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM90A25P Gene

Localization for FAM90A25P Gene

No data available for Gene Ontology (GO) - Cellular Components for FAM90A25P Gene

Pathways for FAM90A25P Gene

SuperPathways for FAM90A25P Gene

No Data Available

Interacting Proteins for FAM90A25P Gene

Gene Ontology (GO) - Biological Process for FAM90A25P Gene

None

No data available for Pathways by source for FAM90A25P Gene

Transcripts for FAM90A25P Gene

mRNA/cDNA for FAM90A25P Gene

(2) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM90A25P Gene

Family with sequence similarity 90, member A7 pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM90A25P Gene

No ASD Table

Relevant External Links for FAM90A25P Gene

GeneLoc Exon Structure for
FAM90A25P
ECgene alternative splicing isoforms for
FAM90A25P

Expression for FAM90A25P Gene

mRNA expression in normal human tissues for FAM90A25P Gene

SOURCE GeneReport for Unigene cluster for FAM90A25P Gene Hs.650464

genes like me logo Genes that share expressions with FAM90A25P: view

Orthologs for FAM90A25P Gene

Evolution for FAM90A25P Gene

ENSEMBL:
Gene Tree for FAM90A25P (if available)
TreeFam:
Gene Tree for FAM90A25P (if available)

No data available for Orthologs for FAM90A25P Gene

Paralogs for FAM90A25P Gene

No data available for Paralogs for FAM90A25P Gene

Variants for FAM90A25P Gene

Sequence variations from dbSNP and Humsavar for FAM90A25P Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs1061553 -- 12,414,058(+) TGTGG(A/C/T)GGGAG downstream-variant-500B
rs1065010 -- 12,414,065(+) GGAGG(C/T)GAGAC downstream-variant-500B
rs2684063 -- 12,419,148(+) TGCTG(C/G)AGCAG upstream-variant-2KB
rs2719481 -- 12,418,297(+) CTGTG(C/T)GCATC upstream-variant-2KB
rs2719484 -- 12,419,057(+) AGGGA(C/T)TGGGT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM90A25P Gene

Variant ID Type Subtype PubMed ID
nsv516685 CNV Gain+Loss 19592680
nsv428195 CNV Gain 18775914
dgv2199e1 CNV Complex 17122850
dgv2200e1 CNV Complex 17122850
esv2736614 CNV Deletion 23290073
dgv1270e199 CNV Deletion 23128226
dgv244e55 CNV Gain 17911159
nsv890374 CNV Gain 21882294
nsv8288 CNV Gain+Loss 18304495
dgv2203e1 CNV Complex 17122850
dgv2204e1 CNV Complex 17122850
nsv821657 CNV Loss 15273396
esv25198 CNV Gain+Loss 19812545
nsv831234 CNV Loss 17160897
dgv2207e1 CNV Complex 17122850
nsv469553 CNV Loss 16826518
nsv471652 CNV Gain+Loss 15918152
nsv890381 CNV Gain 21882294
dgv7706n71 CNV Gain 21882294
dgv2209e1 CNV Complex 17122850
dgv245e55 CNV Gain 17911159
dgv2210e1 CNV Complex 17122850
dgv246e55 CNV Gain 17911159
nsv831235 CNV Loss 17160897
dgv140n17 CNV Loss 16327808
esv1005031 CNV Gain 20482838
nsv890387 CNV Gain 21882294
nsv831236 CNV Loss 17160897

Relevant External Links for FAM90A25P Gene

HapMap Linkage Disequilibrium report
FAM90A25P

Disorders for FAM90A25P Gene

No disorders were found for FAM90A25P Gene.

No data available for UniProtKB/Swiss-Prot for FAM90A25P Gene

Publications for FAM90A25P Gene

  1. Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events. (PMID: 17684299) Bosch N. … Estivill X. (Hum. Mol. Genet. 2007) 3
  2. Analysis of the multi-copy gene family FAM90A as a copy number variant in different ethnic backgrounds. (PMID: 18602769) Bosch N. … Estivill X. (Gene 2008) 3

Products for FAM90A25P Gene

Sources for FAM90A25P Gene

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