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FAM90A11P Gene(Pseudogene)

Family With Sequence Similarity 90 Member A11, Pseudogene

GCID:
GC08M008011
GIFtS:
14
Genes Participants
UDN Logo

Aliases for FAM90A11P Gene

Aliases for FAM90A11P Gene

  • Family With Sequence Similarity 90 Member A11, Pseudogene 2 5
  • Family With Sequence Similarity 90, Member A11 2 3
  • Family With Sequence Similarity 90, Member A11, Pseudogene 2
  • FAM90A11 3

External Ids for FAM90A11P Gene

Previous HGNC Symbols for FAM90A11P Gene

  • FAM90A11

Previous GeneCards Identifiers for FAM90A11P Gene

  • GC08M007907
  • GC08M007881
  • GC08M007883
  • GC08M007891
  • GC08M007894
  • GC08M007898
  • GC08M007902

Summaries for FAM90A11P Gene

GeneCards Summary for FAM90A11P Gene

FAM90A11P (Family With Sequence Similarity 90 Member A11, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM90A11P Gene

Genomics for FAM90A11P Gene

Products:

  1. Regulatory Element

Regulatory Elements for FAM90A11P Gene

Enhancers for FAM90A11P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G008285 1.9 FANTOM5 Ensembl ENCODE dbSUPER 9.8 -271.4 -271438 5.3 PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF766 FOS SP5 FAM86B3P FAM66B FAM66E OR7E154P FAM90A12P FAM90A11P ALG1L13P PRAG1
GH08G008309 1.5 Ensembl ENCODE dbSUPER 10.3 -294.4 -294396 4.1 FOXA2 SIN3A GLI4 ZNF48 ZNF121 GATA2 ZNF143 FOS TSHZ1 PPARG FAM86B3P FAM66E FAM66B FAM90A11P ALG1L13P PRAG1
GH08G008788 1.1 Ensembl ENCODE 11.1 -773.2 -773221 3.1 HDGF PKNOX1 ZNF133 ZSCAN4 YBX1 PLRG1 GATA2 SCRT2 RELB FOS FAM86B3P FAM66E MFHAS1 RNU6-682P FAM90A11P ENSG00000254153 ENSG00000254367
GH08G008427 1.1 ENCODE 9.8 -411.7 -411676 3.0 FOXA2 PKNOX1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF207 FOS SP5 FAM66E OR7E154P FAM86B3P FAM90A12P FAM90A11P PRAG1 ALG1L13P ENSG00000253505 ENSG00000254153
GH08G008701 1 ENCODE 9.8 -685.0 -685008 1.9 ATF1 AGO1 ZFP64 ARID4B SIN3A ZNF48 GLIS2 ELK1 ZNF143 KLF13 CLDN23 FAM66E OR7E154P FAM86B3P FAM90A12P FAM90A11P GC08P008703
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAM90A11P on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM90A11P Gene

Chromosome:
8
Start:
8,011,782 bp from pter
End:
8,017,012 bp from pter
Size:
5,231 bases
Orientation:
Minus strand

Genomic View for FAM90A11P Gene

Genes around FAM90A11P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM90A11P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM90A11P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for FAM90A11P Gene

Proteins for FAM90A11P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Protein Expression for FAM90A11P Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Post-translational modifications for FAM90A11P Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM90A11P Gene

Domains & Families for FAM90A11P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM90A11P Gene

Function for FAM90A11P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM90A11P Gene

Localization for FAM90A11P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM90A11P Gene

Pathways & Interactions for FAM90A11P Gene

SuperPathways for FAM90A11P Gene

PathCards logo More details on SuperPathways for FAM90A11P
No Data Available

Interacting Proteins for FAM90A11P Gene

Gene Ontology (GO) - Biological Process for FAM90A11P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM90A11P Gene

Drugs & Compounds for FAM90A11P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for FAM90A11P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for FAM90A11P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM90A11P Gene

No ASD Table

Relevant External Links for FAM90A11P Gene

GeneLoc Exon Structure for
FAM90A11P
ECgene alternative splicing isoforms for
FAM90A11P

Expression for FAM90A11P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM90A11P Gene

mRNA expression in normal human tissues for FAM90A11P Gene
mRNA expression by GTEx for FAM90A11P Gene

Protein differential expression in normal tissues from HIPED for FAM90A11P Gene

This gene is overexpressed in Heart (68.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for FAM90A11P Gene



Protein tissue co-expression partners for FAM90A11P Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of FAM90A11P Gene:

FAM90A11P
genes like me logo Genes that share expression patterns with FAM90A11P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM90A11P Gene

Orthologs for FAM90A11P Gene

Evolution for FAM90A11P Gene

ENSEMBL:
Gene Tree for FAM90A11P (if available)
TreeFam:
Gene Tree for FAM90A11P (if available)

No data available for Orthologs for FAM90A11P Gene

Paralogs for FAM90A11P Gene

No data available for Paralogs for FAM90A11P Gene

Variants for FAM90A11P Gene

Relevant External Links for FAM90A11P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM90A11P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM90A11P Gene

Disorders for FAM90A11P Gene

No disorders were found for FAM90A11P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FAM90A11P Gene

Publications for FAM90A11P Gene

  1. Analysis of the multi-copy gene family FAM90A as a copy number variant in different ethnic backgrounds. (PMID: 18602769) Bosch N. … Estivill X. (Gene 2008) 3 64
  2. Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events. (PMID: 17684299) Bosch N. … Estivill X. (Hum. Mol. Genet. 2007) 3 64

Products for FAM90A11P Gene

Sources for FAM90A11P Gene

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