Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FAM90A10P Gene

Aliases for FAM90A10P Gene

  • Family With Sequence Similarity 90, Member A10, Pseudogene 2
  • FAM90A10 3 4 6
  • Family With Sequence Similarity 90, Member A10 2
  • Putative Protein FAM90A10 3

External Ids for FAM90A10P Gene

Previous Symbols for FAM90A10P Gene

  • FAM90A10

Summaries for FAM90A10P Gene

Entrez Gene Summary for FAM90A10P Gene

  • FAM90A10 belongs to subfamily II of the primate-specific FAM90A gene family, which originated from multiple duplications and rearrangements (Bosch et al., 2007 [PubMed 17684299]). For background information on the FAM90A gene family, as well as information on the evolution of FAM90A genes, see FAM90A1 (MIM 613041).[supplied by OMIM, Oct 2009]

GeneCards Summary for FAM90A10P Gene

FAM90A10P (Family With Sequence Similarity 90, Member A10, Pseudogene) is a Pseudogene. GO annotations related to this gene include nucleic acid binding.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM90A10P Gene

Genomics for FAM90A10P Gene

Genomic Location for FAM90A10P Gene

Start:
7,768,977 bp from pter
End:
7,771,988 bp from pter
Size:
3,012 bases
Orientation:
Plus strand

Genomic View for FAM90A10P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM90A10P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM90A10P Gene

No data available for Regulatory Elements for FAM90A10P Gene

Proteins for FAM90A10P Gene

  • Protein details for FAM90A10P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NDY2-F90AA_HUMAN
    Recommended name:
    Putative protein FAM90A10P
    Protein Accession:
    A6NDY2
    Secondary Accessions:

    Protein attributes for FAM90A10P Gene

    Size:
    464 amino acids
    Molecular mass:
    49635 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM90A10P Gene

Proteomics data for FAM90A10P Gene at MOPED

Post-translational modifications for FAM90A10P Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for FAM90A10P Gene

Domains for FAM90A10P Gene

Protein Domains for FAM90A10P Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

A6NDY2

UniProtKB/Swiss-Prot:

F90AA_HUMAN
Family:
  • Belongs to the FAM90 family.:
    • A6NDY2
genes like me logo Genes that share domains with FAM90A10P: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for FAM90A10P Gene

Function for FAM90A10P Gene

Gene Ontology (GO) - Molecular Function for FAM90A10P Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0008270 zinc ion binding IEA --
genes like me logo Genes that share ontologies with FAM90A10P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM90A10P Gene

Localization for FAM90A10P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM90A10P Gene

Pathways for FAM90A10P Gene

SuperPathways for FAM90A10P Gene

No Data Available

Interacting Proteins for FAM90A10P Gene

Gene Ontology (GO) - Biological Process for FAM90A10P Gene

None

No data available for Pathways by source for FAM90A10P Gene

Transcripts for FAM90A10P Gene

mRNA/cDNA for FAM90A10P Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM90A10P Gene

Putative protein FAM90A10:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM90A10P Gene

No ASD Table

Relevant External Links for FAM90A10P Gene

GeneLoc Exon Structure for
FAM90A10P
ECgene alternative splicing isoforms for
FAM90A10P

Expression for FAM90A10P Gene

mRNA expression in normal human tissues for FAM90A10P Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM90A10P Gene

SOURCE GeneReport for Unigene cluster for FAM90A10P Gene Hs.694406

genes like me logo Genes that share expressions with FAM90A10P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM90A10P Gene

Orthologs for FAM90A10P Gene

Evolution for FAM90A10P Gene

ENSEMBL:
Gene Tree for FAM90A10P (if available)
TreeFam:
Gene Tree for FAM90A10P (if available)

No data available for Orthologs for FAM90A10P Gene

Paralogs for FAM90A10P Gene

genes like me logo Genes that share paralogs with FAM90A10P: view

No data available for Paralogs for FAM90A10P Gene

Variants for FAM90A10P Gene

Sequence variations from dbSNP and Humsavar for FAM90A10P Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs62640749 -- 7,768,004(+) CTGAG(G/T)GGTAT upstream-variant-2KB
rs62640750 -- 7,768,008(+) GGGGT(A/T)TTTGC upstream-variant-2KB
rs62640751 -- 7,768,130(+) CGAGA(A/C)AACAT upstream-variant-2KB
rs62640752 -- 7,770,648(+) AAGGC(G/T)AAACC intron-variant
rs62640753 -- 7,771,501(+) CCTGA(A/C)CTTCC downstream-variant-500B

Relevant External Links for FAM90A10P Gene

HapMap Linkage Disequilibrium report
FAM90A10P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM90A10P Gene

Disorders for FAM90A10P Gene

No disorders were found for FAM90A10P Gene.

No data available for UniProtKB/Swiss-Prot for FAM90A10P Gene

Publications for FAM90A10P Gene

  1. Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events. (PMID: 17684299) Bosch N. … Estivill X. (Hum. Mol. Genet. 2007) 3
  2. Analysis of the multi-copy gene family FAM90A as a copy number variant in different ethnic backgrounds. (PMID: 18602769) Bosch N. … Estivill X. (Gene 2008) 3
  3. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4

Products for FAM90A10P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM90A10P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM90A10P
    • Block miRNA regulation of FAM90A10P using miScript Target Protectors

    Sources for FAM90A10P Gene

    Back to Top

    Content