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Aliases for FAM87B Gene

Subcategory (RNA class) for FAM87B Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for FAM87B Gene

  • Family With Sequence Similarity 87 Member B 2 3 5
  • Family With Sequence Similarity 87, Member B 2

External Ids for FAM87B Gene

Previous GeneCards Identifiers for FAM87B Gene

  • GC01P000796
  • GC01P000742
  • GC01U901634
  • GC08M000320
  • GC01P000022
  • GC01P000754
  • GC01P000772
  • GC01P000804

Summaries for FAM87B Gene

GeneCards Summary for FAM87B Gene

FAM87B (Family With Sequence Similarity 87 Member B) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FAM87B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM87B Gene

Genomics for FAM87B Gene

Regulatory Elements for FAM87B Gene

Enhancers for FAM87B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H001775 1.7 FANTOM5 ENCODE dbSUPER 21 +962.2 962155 8.6 HDGF PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 CBX5 NADK INTS11 ENSG00000240731 CCNL2 CDK11A LOC100288379 LOC105378949 SDF4 ENSG00000230092 ATAD3B
GH01H001229 1.4 ENCODE dbSUPER 21.9 +414.0 413951 3.5 ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF766 ZNF143 ZNF207 FOS SP3 INTS11 ENSG00000240731 B3GALT6 ATAD3B LINC00115 FAM87B SLC35E2 CCNL2 LOC100288379 ENSG00000234396
GH01H001373 1.2 ENCODE 23.5 +557.8 557753 3.9 MLX ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF143 SP3 NFYC ENSG00000230092 CDK11A ATAD3B LOC100288379 CCNL2 INTS11 ENSG00000237094 SDF4 ENSG00000240731 LOC100288069
GH01H001420 1 ENCODE 21.9 +604.8 604814 3 FOXA2 MLX ARID4B DMAP1 SLC30A9 ZNF766 GLIS2 CAVIN1 SP5 REST ANKRD65 ENSG00000240731 ATAD3B INTS11 FAM87B CCNL2 LOC100288379 ENSG00000234396 LINC00115 MXRA8
GH01H001356 1.7 FANTOM5 ENCODE dbSUPER 11.8 +542.0 542000 6.5 HDGF ATF1 ARNT ARID4B YBX1 DMAP1 ZNF48 ZNF2 GLIS2 FOS SLC35E2 LOC100129381 ANKRD65 CCNL2 LOC100288379 SDF4 ENSG00000272455 INTS11 ENSG00000240731 LINC00115
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAM87B on UCSC Golden Path with GeneCards custom track

Promoters for FAM87B Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000000085 129 201 HDAC1 ATF1 HDAC2 ZBTB21 KDM1A PRDM1 CREM

Genomic Locations for FAM87B Gene

Genomic Locations for FAM87B Gene
2,467 bases
Plus strand

Genomic View for FAM87B Gene

Genes around FAM87B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM87B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM87B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM87B Gene

Proteins for FAM87B Gene

Post-translational modifications for FAM87B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM87B Gene

Domains & Families for FAM87B Gene

Suggested Antigen Peptide Sequences for FAM87B Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FAM87B Gene

Function for FAM87B Gene

Phenotypes From GWAS Catalog for FAM87B Gene

Phenotypes for FAM87B Gene

GenomeRNAi human phenotypes for FAM87B:
genes like me logo Genes that share phenotypes with FAM87B: view

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM87B Gene

Localization for FAM87B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM87B Gene

Pathways & Interactions for FAM87B Gene

SuperPathways for FAM87B Gene

No Data Available

Interacting Proteins for FAM87B Gene

Gene Ontology (GO) - Biological Process for FAM87B Gene


No data available for Pathways by source and SIGNOR curated interactions for FAM87B Gene

Drugs & Compounds for FAM87B Gene

No Compound Related Data Available

Transcripts for FAM87B Gene

mRNA/cDNA for FAM87B Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM87B Gene

Family with sequence similarity 87, member B:
Representative Sequences:

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM87B Gene

No ASD Table

Relevant External Links for FAM87B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FAM87B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM87B Gene

Protein differential expression in normal tissues from HIPED for FAM87B Gene

This gene is overexpressed in Monocytes (30.3), Neutrophil (24.5), and Tlymphocyte (10.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for FAM87B Gene

Protein tissue co-expression partners for FAM87B Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of FAM87B Gene:


SOURCE GeneReport for Unigene cluster for FAM87B Gene:

genes like me logo Genes that share expression patterns with FAM87B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM87B Gene

Orthologs for FAM87B Gene

Evolution for FAM87B Gene

Gene Tree for FAM87B (if available)
Gene Tree for FAM87B (if available)

No data available for Orthologs for FAM87B Gene

Paralogs for FAM87B Gene

(1) SIMAP similar genes for FAM87B Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM87B: view

No data available for Paralogs for FAM87B Gene

Variants for FAM87B Gene

Sequence variations from dbSNP and Humsavar for FAM87B Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000300261 -- 819,203(+) CTGAG(C/G)ATACA nc-transcript-variant
rs1000534241 -- 818,049(+) GTGGG(A/C)CCCGA nc-transcript-variant
rs1000585149 -- 817,778(+) CAGTA(C/T)GGATT nc-transcript-variant
rs1002146606 -- 816,093(+) AACCA(C/T)TAGGT upstream-variant-2KB
rs1002219991 -- 816,539(+) GAAAC(A/G)TTTTT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM87B Gene

Variant ID Type Subtype PubMed ID
nsv999785 CNV gain 25217958
nsv950386 CNV deletion 24416366
nsv945734 CNV duplication 23825009
nsv517709 CNV gain+loss 19592680
nsv482937 CNV loss 15286789
nsv471522 CNV gain 19718026
nsv1159749 CNV duplication 26073780
nsv10161 CNV gain+loss 18304495
nsv1005935 CNV gain 25217958
nsv1004962 CNV gain 25217958
nsv1003571 CNV loss 25217958
esv3890635 CNV gain 25118596
esv3584978 CNV gain 21293372
esv3584977 CNV loss 21293372
esv3584976 CNV gain 21293372
esv33946 CNV gain 17666407
esv2762129 CNV gain 21179565
esv27271 CNV gain 19812545
dgv5n100 CNV gain 25217958
dgv3n111 CNV duplication 26073780
dgv2n111 CNV duplication 26073780
dgv1n67 CNV gain 20364138
dgv1n111 CNV duplication 26073780
dgv1e55 CNV gain 17911159

Relevant External Links for FAM87B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM87B Gene

Disorders for FAM87B Gene

Relevant External Links for FAM87B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for FAM87B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM87B Gene

Publications for FAM87B Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60

Products for FAM87B Gene

Sources for FAM87B Gene

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