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Aliases for FAM87A Gene

Subcategory (RNA class) for FAM87A Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM87A Gene

  • Family With Sequence Similarity 87 Member A 2 3 5
  • Family With Sequence Similarity 87, Member A 2

External Ids for FAM87A Gene

Previous GeneCards Identifiers for FAM87A Gene

  • GC08M000318
  • GC08U900690
  • GC08M000169

Summaries for FAM87A Gene

GeneCards Summary for FAM87A Gene

FAM87A (Family With Sequence Similarity 87 Member A) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM87A Gene

Genomics for FAM87A Gene

Genomic Location for FAM87A Gene

Chromosome:
8
Start:
375,931 bp from pter
End:
383,174 bp from pter
Size:
7,244 bases
Orientation:
Minus strand

Genomic View for FAM87A Gene

Genes around FAM87A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM87A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM87A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM87A Gene

No data available for Regulatory Elements for FAM87A Gene

Proteins for FAM87A Gene

  • Protein details for FAM87A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C7U9-FA87A_HUMAN
    Recommended name:
    Protein FAM87A
    Protein Accession:
    P0C7U9

    Protein attributes for FAM87A Gene

    Size:
    286 amino acids
    Molecular mass:
    31739 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM87A Gene

Proteomics data for FAM87A Gene at MOPED

Post-translational modifications for FAM87A Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM87A Gene

Domains & Families for FAM87A Gene

Protein Domains for FAM87A Gene

ProtoNet:

Suggested Antigen Peptide Sequences for FAM87A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P0C7U9

UniProtKB/Swiss-Prot:

FA87A_HUMAN :
  • Belongs to the FAM87 family.
Family:
  • Belongs to the FAM87 family.
genes like me logo Genes that share domains with FAM87A: view

No data available for Gene Families for FAM87A Gene

Function for FAM87A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM87A Gene

Localization for FAM87A Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM87A Gene

Membrane; Multi-pass membrane protein.

No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM87A Gene

Pathways & Interactions for FAM87A Gene

SuperPathways for FAM87A Gene

No Data Available

Interacting Proteins for FAM87A Gene

Gene Ontology (GO) - Biological Process for FAM87A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM87A Gene

Drugs & Compounds for FAM87A Gene

No Compound Related Data Available

Transcripts for FAM87A Gene

mRNA/cDNA for FAM87A Gene

(3) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM87A Gene

Family with sequence similarity 87, member A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM87A Gene

No ASD Table

Relevant External Links for FAM87A Gene

GeneLoc Exon Structure for
FAM87A
ECgene alternative splicing isoforms for
FAM87A

Expression for FAM87A Gene

mRNA expression in normal human tissues for FAM87A Gene

mRNA differential expression in normal tissues according to GTEx for FAM87A Gene

This gene is overexpressed in Pancreas (x9.1), Brain - Cortex (x9.1), and Brain - Frontal Cortex (BA9) (x8.5).

SOURCE GeneReport for Unigene cluster for FAM87A Gene Hs.591390

genes like me logo Genes that share expression patterns with FAM87A: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM87A Gene

Orthologs for FAM87A Gene

Evolution for FAM87A Gene

ENSEMBL:
Gene Tree for FAM87A (if available)
TreeFam:
Gene Tree for FAM87A (if available)

No data available for Orthologs for FAM87A Gene

Paralogs for FAM87A Gene

(1) SIMAP similar genes for FAM87A Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM87A: view

No data available for Paralogs for FAM87A Gene

Variants for FAM87A Gene

Sequence variations from dbSNP and Humsavar for FAM87A Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs727785 -- 383,555(-) ACAGC(G/T)CACTG upstream-variant-2KB
rs727786 -- 383,500(-) AGATA(G/T)GAAAA upstream-variant-2KB
rs935564 -- 380,846(-) TCTCA(C/T)AGTGC intron-variant
rs1550950 -- 384,709(-) GAGTA(C/T)AGTTG upstream-variant-2KB
rs1979081 -- 384,288(-) CTCCC(A/C)AACGT upstream-variant-2KB

Relevant External Links for FAM87A Gene

HapMap Linkage Disequilibrium report
FAM87A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM87A Gene

Disorders for FAM87A Gene

Relevant External Links for FAM87A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM87A

No disorders were found for FAM87A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM87A Gene

Publications for FAM87A Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 67

Products for FAM87A Gene

Sources for FAM87A Gene

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