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Aliases for FAM86KP Gene

Aliases for FAM86KP Gene

  • Family With Sequence Similarity 86 Member K, Pseudogene 2 5
  • Family With Sequence Similarity 86, Member K, Pseudogene 2
  • Protein FAM86A-Like 3

External Ids for FAM86KP Gene

Summaries for FAM86KP Gene

GeneCards Summary for FAM86KP Gene

FAM86KP (Family With Sequence Similarity 86 Member K, Pseudogene) is a Pseudogene. An important paralog of this gene is FAM86B2.

Additional gene information for FAM86KP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM86KP Gene

Genomics for FAM86KP Gene

Regulatory Elements for FAM86KP Gene

Enhancers for FAM86KP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H009151 1.4 FANTOM5 ENCODE 14 -0.1 -79 2 HDGF ATF1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 GLIS2 KLF7 FAM86KP GC04M009091
GH04H009380 0.6 Ensembl 27.9 +227.9 227922 0 CTCF ZNF654 ZNF680 ZBTB2 NRF1 REST RAD21 GLIS2 ZNF423 FAM86KP ENSG00000205959 ENSG00000219492 USP17L6P
GH04H009602 1.1 FANTOM5 Ensembl ENCODE 13.9 +451.0 451029 3 ELF3 RFX1 RFX3 BMI1 ELF1 MLLT1 EGR2 FAM86KP OR7E84P ENPP7P11 RPS24P11 SNRPCP13
GH04H009689 1.2 FANTOM5 ENCODE 9.4 +538.2 538231 3 HDGF ATF1 ARID4B ZNF76 ZEB1 GLIS2 ATF7 SP3 SP5 MXD4 OR7E83P FAM86KP ENPP7P11 OR7E84P ENPP7P10 PIR34980
GH04H009102 0.6 ENCODE 15.3 -50.6 -50621 0 SMARCE1 CTCF NFIB DPF2 ZNF217 GATA3 CTBP1 CREB1 FAM86KP GC04M009091 GC04P009085
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAM86KP on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM86KP Gene

Chromosome:
4
Start:
9,153,296 bp from pter
End:
9,165,451 bp from pter
Size:
12,156 bases
Orientation:
Plus strand

Genomic View for FAM86KP Gene

Genes around FAM86KP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM86KP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM86KP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM86KP Gene

Proteins for FAM86KP Gene

Post-translational modifications for FAM86KP Gene

No Post-translational modifications

Other Protein References for FAM86KP Gene

No data available for DME Specific Peptides for FAM86KP Gene

Domains & Families for FAM86KP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM86KP Gene

Function for FAM86KP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM86KP Gene

Localization for FAM86KP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM86KP Gene

Pathways & Interactions for FAM86KP Gene

SuperPathways for FAM86KP Gene

No Data Available

Interacting Proteins for FAM86KP Gene

Gene Ontology (GO) - Biological Process for FAM86KP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM86KP Gene

Drugs & Compounds for FAM86KP Gene

No Compound Related Data Available

Transcripts for FAM86KP Gene

mRNA/cDNA for FAM86KP Gene

(4) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM86KP Gene

No ASD Table

Relevant External Links for FAM86KP Gene

GeneLoc Exon Structure for
FAM86KP
ECgene alternative splicing isoforms for
FAM86KP

Expression for FAM86KP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM86KP Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM86KP Gene:

FAM86KP
genes like me logo Genes that share expression patterns with FAM86KP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM86KP Gene

Orthologs for FAM86KP Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for FAM86KP Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC454371 33
  • 93.96 (n)
Species where no ortholog for FAM86KP was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM86KP Gene

ENSEMBL:
Gene Tree for FAM86KP (if available)
TreeFam:
Gene Tree for FAM86KP (if available)

Paralogs for FAM86KP Gene

Paralogs for FAM86KP Gene

genes like me logo Genes that share paralogs with FAM86KP: view

Variants for FAM86KP Gene

Sequence variations from dbSNP and Humsavar for FAM86KP Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs1000101981 -- 9,152,856(+) GTCCC(A/G)CCTCC upstream-variant-2KB
rs1000124993 -- 9,152,949(+) ACGCC(A/G)CCAAC upstream-variant-2KB
rs1000479281 -- 9,155,439(+) TCACA(G/T)AGAGC intron-variant, nc-transcript-variant
rs1000835014 -- 9,152,475(+) TCAAA(C/T)CCCTC nc-transcript-variant, upstream-variant-2KB
rs1001031473 -- 9,154,852(+) GCCAT(A/G)GGAAG intron-variant, nc-transcript-variant

Relevant External Links for FAM86KP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM86KP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM86KP Gene

Disorders for FAM86KP Gene

No disorders were found for FAM86KP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FAM86KP Gene

Publications for FAM86KP Gene

No publications were found for FAM86KP Gene.

Products for FAM86KP Gene

Sources for FAM86KP Gene

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