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Aliases for FAM86JP Gene

Aliases for FAM86JP Gene

  • Family With Sequence Similarity 86 Member J, Pseudogene 2 5
  • Family With Sequence Similarity 86, Member J, Pseudogene 2
  • Family With Sequence Similarity 86, Member A Pseudogene 3

External Ids for FAM86JP Gene

Previous GeneCards Identifiers for FAM86JP Gene

  • GC03P125637

Summaries for FAM86JP Gene

GeneCards Summary for FAM86JP Gene

FAM86JP (Family With Sequence Similarity 86 Member J, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM86JP Gene

Genomics for FAM86JP Gene

Regulatory Elements for FAM86JP Gene

Promoters for FAM86JP Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around FAM86JP on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM86JP Gene

Chromosome:
3
Start:
125,916,601 bp from pter
End:
125,930,024 bp from pter
Size:
13,424 bases
Orientation:
Plus strand

Genomic View for FAM86JP Gene

Genes around FAM86JP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM86JP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM86JP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM86JP Gene

Proteins for FAM86JP Gene

  • Protein details for FAM86JP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q05BU3-F86JP_HUMAN
    Recommended name:
    Putative protein FAM86JP
    Protein Accession:
    Q05BU3
    Secondary Accessions:
    • Q8IW37

    Protein attributes for FAM86JP Gene

    Size:
    40 amino acids
    Molecular mass:
    4003 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM86JP Gene

Proteomics data for FAM86JP Gene at MOPED

Post-translational modifications for FAM86JP Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM86JP Gene

Domains & Families for FAM86JP Gene

Protein Domains for FAM86JP Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM86JP: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM86JP Gene

Function for FAM86JP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM86JP Gene

Localization for FAM86JP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM86JP Gene

Pathways & Interactions for FAM86JP Gene

SuperPathways for FAM86JP Gene

No Data Available

Interacting Proteins for FAM86JP Gene

Gene Ontology (GO) - Biological Process for FAM86JP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM86JP Gene

Drugs & Compounds for FAM86JP Gene

No Compound Related Data Available

Transcripts for FAM86JP Gene

mRNA/cDNA for FAM86JP Gene

(4) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM86JP Gene

Family with sequence similarity 86, member A pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM86JP Gene

No ASD Table

Relevant External Links for FAM86JP Gene

GeneLoc Exon Structure for
FAM86JP
ECgene alternative splicing isoforms for
FAM86JP

Expression for FAM86JP Gene

mRNA expression in normal human tissues for FAM86JP Gene

Protein differential expression in normal tissues from HIPED for FAM86JP Gene

This gene is overexpressed in Stomach (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FAM86JP Gene



SOURCE GeneReport for Unigene cluster for FAM86JP Gene Hs.553949

genes like me logo Genes that share expression patterns with FAM86JP: view

Protein tissue co-expression partners for FAM86JP Gene

- Elite partner

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM86JP Gene

Orthologs for FAM86JP Gene

Evolution for FAM86JP Gene

ENSEMBL:
Gene Tree for FAM86JP (if available)
TreeFam:
Gene Tree for FAM86JP (if available)

No data available for Orthologs for FAM86JP Gene

Paralogs for FAM86JP Gene

No data available for Paralogs for FAM86JP Gene

Variants for FAM86JP Gene

Sequence variations from dbSNP and Humsavar for FAM86JP Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1806804 -- 125,924,719(-) AAAAC(C/G)AGCTC intron-variant
rs1814747 -- 125,922,514(-) GTCTC(C/T)ACCAG intron-variant
rs1814748 -- 125,922,494(-) CAGCT(C/T)GTCCA intron-variant
rs2062772 -- 125,921,042(-) ACGTG(G/T)CTGCA intron-variant
rs2062773 -- 125,920,805(-) AGAAC(A/G)TTGGT intron-variant

Relevant External Links for FAM86JP Gene

HapMap Linkage Disequilibrium report
FAM86JP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM86JP Gene

Disorders for FAM86JP Gene

Relevant External Links for FAM86JP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM86JP

No disorders were found for FAM86JP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM86JP Gene

Publications for FAM86JP Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67
  2. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh J.H. … Kim N.S. (Mamm. Genome 2005) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FAM86JP Gene

Sources for FAM86JP Gene

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