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Aliases for FAM86JP Gene

Aliases for FAM86JP Gene

  • Family With Sequence Similarity 86, Member J, Pseudogene 2
  • Family With Sequence Similarity 86, Member A Pseudogene 3

External Ids for FAM86JP Gene

Summaries for FAM86JP Gene

GeneCards Summary for FAM86JP Gene

FAM86JP (Family With Sequence Similarity 86, Member J, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM86JP Gene

Genomics for FAM86JP Gene

Genomic Location for FAM86JP Gene

Start:
125,916,601 bp from pter
End:
125,930,024 bp from pter
Size:
13,424 bases
Orientation:
Plus strand

Genomic View for FAM86JP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM86JP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM86JP Gene

No data available for Regulatory Elements for FAM86JP Gene

Proteins for FAM86JP Gene

  • Protein details for FAM86JP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q05BU3-F86JP_HUMAN
    Recommended name:
    Putative protein FAM86JP
    Protein Accession:
    Q05BU3
    Secondary Accessions:
    • Q8IW37

    Protein attributes for FAM86JP Gene

    Size:
    40 amino acids
    Molecular mass:
    4003 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM86JP Gene

Proteomics data for FAM86JP Gene at MOPED

Post-translational modifications for FAM86JP Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM86JP Gene

Domains for FAM86JP Gene

Protein Domains for FAM86JP Gene

ProtoNet:
genes like me logo Genes that share domains with FAM86JP: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FAM86JP Gene

Function for FAM86JP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM86JP Gene

Localization for FAM86JP Gene

No data available for Gene Ontology (GO) - Cellular Components for FAM86JP Gene

Pathways for FAM86JP Gene

SuperPathways for FAM86JP Gene

No Data Available

Interacting Proteins for FAM86JP Gene

Gene Ontology (GO) - Biological Process for FAM86JP Gene

None

No data available for Pathways by source for FAM86JP Gene

Transcripts for FAM86JP Gene

mRNA/cDNA for FAM86JP Gene

(4) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM86JP Gene

Family with sequence similarity 86, member A pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM86JP Gene

No ASD Table

Relevant External Links for FAM86JP Gene

GeneLoc Exon Structure for
FAM86JP
ECgene alternative splicing isoforms for
FAM86JP

Expression for FAM86JP Gene

mRNA expression in normal human tissues for FAM86JP Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM86JP Gene

SOURCE GeneReport for Unigene cluster for FAM86JP Gene Hs.553949

genes like me logo Genes that share expressions with FAM86JP: view

Orthologs for FAM86JP Gene

Evolution for FAM86JP Gene

ENSEMBL:
Gene Tree for FAM86JP (if available)
TreeFam:
Gene Tree for FAM86JP (if available)

No data available for Orthologs for FAM86JP Gene

Paralogs for FAM86JP Gene

No data available for Paralogs for FAM86JP Gene

Variants for FAM86JP Gene

Sequence variations from dbSNP and Humsavar for FAM86JP Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs1806804 -- 125,924,719(-) AAAAC(C/G)AGCTC intron-variant
rs1814747 -- 125,922,514(-) GTCTC(C/T)ACCAG intron-variant
rs1814748 -- 125,922,494(-) CAGCT(C/T)GTCCA intron-variant
rs2062772 -- 125,921,042(-) ACGTG(G/T)CTGCA intron-variant
rs2062773 -- 125,920,805(-) AGAAC(A/G)TTGGT intron-variant

Relevant External Links for FAM86JP Gene

HapMap Linkage Disequilibrium report
FAM86JP

No data available for Structural Variations from Database of Genomic Variants (DGV) for FAM86JP Gene

Disorders for FAM86JP Gene

No disorders were found for FAM86JP Gene.

No data available for UniProtKB/Swiss-Prot for FAM86JP Gene

Publications for FAM86JP Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh J.H. … Kim N.S. (Mamm. Genome 2005) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4

Products for FAM86JP Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM86JP
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM86JP
    • Block miRNA regulation of FAM86JP using miScript Target Protectors

    Sources for FAM86JP Gene

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