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Aliases for FAM86JP Gene

Aliases for FAM86JP Gene

  • Family With Sequence Similarity 86 Member J, Pseudogene 2 5
  • Family With Sequence Similarity 86, Member J, Pseudogene 2
  • Family With Sequence Similarity 86, Member A Pseudogene 3

External Ids for FAM86JP Gene

Previous GeneCards Identifiers for FAM86JP Gene

  • GC03P125637

Summaries for FAM86JP Gene

GeneCards Summary for FAM86JP Gene

FAM86JP (Family With Sequence Similarity 86 Member J, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM86JP Gene

Genomics for FAM86JP Gene

Regulatory Elements for FAM86JP Gene

Enhancers for FAM86JP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F125914 0.6 ENCODE 49 +0.1 71 4.7 HDGF ATF1 PKNOX1 ARID4B SIN3A DMAP1 ZNF48 ZNF2 YY1 SLC30A9 FAM86JP LOC101927056 ALG1L
GH03F125911 0.7 ENCODE 43.2 -4.2 -4196 1.2 KLF1 JUN INSM2 KLF17 ZEB1 ZFHX2 ZNF316 GATA3 GLIS2 ELK1 FAM86JP LOC101927056 ENPP7P4 ENSG00000248787 GC03P125912
GH03F125931 1.1 Ensembl 41.3 +14.9 14901 0.6 FAM86JP ALG1L
GH03F125928 0.2 Ensembl 40.3 +12.7 12701 1.0 CTCF KLF1 CEBPG RAD21 ZIC2 ZNF2 ZBTB40 YY1 GATA3 FOS FAM86JP ALG1L ROPN1B LOC101927056
GH03F125831 0.8 Ensembl ENCODE 38.4 -83.6 -83587 4.0 SREBF1 ZBTB40 FAM86JP LOC101927056 ALG1L ENSG00000248787 ENPP7P4 SNRPCP11
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FAM86JP on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM86JP Gene

125,916,601 bp from pter
125,930,024 bp from pter
13,424 bases
Plus strand

Genomic View for FAM86JP Gene

Genes around FAM86JP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM86JP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM86JP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM86JP Gene

Proteins for FAM86JP Gene

  • Protein details for FAM86JP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative protein FAM86JP
    Protein Accession:
    Secondary Accessions:
    • Q8IW37

    Protein attributes for FAM86JP Gene

    40 amino acids
    Molecular mass:
    4003 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM86JP Gene

Post-translational modifications for FAM86JP Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM86JP Gene

Domains & Families for FAM86JP Gene

Protein Domains for FAM86JP Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM86JP: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM86JP Gene

Function for FAM86JP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM86JP Gene

Localization for FAM86JP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM86JP Gene

Pathways & Interactions for FAM86JP Gene

SuperPathways for FAM86JP Gene

No Data Available

Interacting Proteins for FAM86JP Gene

Gene Ontology (GO) - Biological Process for FAM86JP Gene


No data available for Pathways by source and SIGNOR curated interactions for FAM86JP Gene

Transcripts for FAM86JP Gene

mRNA/cDNA for FAM86JP Gene

(4) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM86JP Gene

Family with sequence similarity 86, member A pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM86JP Gene

No ASD Table

Relevant External Links for FAM86JP Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FAM86JP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FAM86JP Gene

Protein differential expression in normal tissues from HIPED for FAM86JP Gene

This gene is overexpressed in Stomach (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FAM86JP Gene

Protein tissue co-expression partners for FAM86JP Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of FAM86JP Gene:


SOURCE GeneReport for Unigene cluster for FAM86JP Gene:

genes like me logo Genes that share expression patterns with FAM86JP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM86JP Gene

Orthologs for FAM86JP Gene

Evolution for FAM86JP Gene

Gene Tree for FAM86JP (if available)
Gene Tree for FAM86JP (if available)

No data available for Orthologs for FAM86JP Gene

Paralogs for FAM86JP Gene

No data available for Paralogs for FAM86JP Gene

Variants for FAM86JP Gene

Sequence variations from dbSNP and Humsavar for FAM86JP Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1047923 -- 125,928,908(+) GTTCC(C/T)CACAA intron-variant, nc-transcript-variant, downstream-variant-500B
rs111292387 -- 125,923,081(+) AAGAT(C/T)GCGCC intron-variant
rs111324805 -- 125,923,446(+) ATGAA(C/T)GGAAT intron-variant
rs111532406 -- 125,916,210(+) TTTAC(C/T)CCCAC upstream-variant-2KB
rs111624634 -- 125,926,079(+) TAGTG(A/G)GACCC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM86JP Gene

Variant ID Type Subtype PubMed ID
esv2759174 CNV loss 17122850
nsv1011457 CNV gain 25217958
nsv10313 CNV loss 18304495
nsv1160975 CNV duplication 26073780
nsv591465 CNV gain 21841781
nsv829716 CNV gain+loss 17160897
nsv967058 CNV duplication 23825009

Relevant External Links for FAM86JP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM86JP Gene

Disorders for FAM86JP Gene

Relevant External Links for FAM86JP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for FAM86JP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM86JP Gene

Publications for FAM86JP Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4 64
  3. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh J.H. … Kim N.S. (Mamm. Genome 2005) 3 64
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for FAM86JP Gene

Sources for FAM86JP Gene

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