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Aliases for FAM86HP Gene

Aliases for FAM86HP Gene

  • Family With Sequence Similarity 86, Member H, Pseudogene 2
  • Family With Sequence Similarity 86, Member A Pseudogene 3

External Ids for FAM86HP Gene

Summaries for FAM86HP Gene

GeneCards Summary for FAM86HP Gene

FAM86HP (Family With Sequence Similarity 86, Member H, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM86HP Gene

Genomics for FAM86HP Gene

Genomic Location for FAM86HP Gene

Start:
130,097,782 bp from pter
End:
130,111,472 bp from pter
Size:
13,691 bases
Orientation:
Minus strand

Genomic View for FAM86HP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM86HP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM86HP Gene

No data available for Regulatory Elements for FAM86HP Gene

Proteins for FAM86HP Gene

Post-translational modifications for FAM86HP Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM86HP Gene

Domains for FAM86HP Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FAM86HP Gene

Function for FAM86HP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM86HP Gene

Localization for FAM86HP Gene

No data available for Gene Ontology (GO) - Cellular Components for FAM86HP Gene

Pathways for FAM86HP Gene

SuperPathways for FAM86HP Gene

No Data Available

Interacting Proteins for FAM86HP Gene

Gene Ontology (GO) - Biological Process for FAM86HP Gene

None

No data available for Pathways by source for FAM86HP Gene

Transcripts for FAM86HP Gene

mRNA/cDNA for FAM86HP Gene

(5) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM86HP Gene

Family with sequence similarity 86, member A pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM86HP Gene

No ASD Table

Relevant External Links for FAM86HP Gene

GeneLoc Exon Structure for
FAM86HP
ECgene alternative splicing isoforms for
FAM86HP

Expression for FAM86HP Gene

mRNA expression in normal human tissues for FAM86HP Gene

SOURCE GeneReport for Unigene cluster for FAM86HP Gene Hs.123633

genes like me logo Genes that share expressions with FAM86HP: view

Orthologs for FAM86HP Gene

Evolution for FAM86HP Gene

ENSEMBL:
Gene Tree for FAM86HP (if available)
TreeFam:
Gene Tree for FAM86HP (if available)

No data available for Orthologs for FAM86HP Gene

Paralogs for FAM86HP Gene

No data available for Paralogs for FAM86HP Gene

Variants for FAM86HP Gene

Sequence variations from dbSNP and Humsavar for FAM86HP Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs2001440 -- 130,110,912(-) TCATG(C/T)GCTGA intron-variant
rs2587970 -- 130,098,961(-) TATGA(C/T)GTTCC nc-transcript-variant
rs2587973 -- 130,108,921(+) AGGAT(A/G)GTTTA intron-variant
rs2587974 -- 130,109,827(+) GCTGC(A/C)TTGCT intron-variant
rs2624597 -- 130,106,506(+) AGCCT(C/G)GCCAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM86HP Gene

Variant ID Type Subtype PubMed ID
dgv1495e1 CNV Complex 17122850
nsv508242 CNV Loss 20534489
nsv877484 CNV Gain 21882294
essv5961 CNV CNV 17122850
dgv1497e1 CNV Complex 17122850
dgv1500e1 CNV Complex 17122850
dgv5256n71 CNV Gain 21882294
nsv4001 CNV Loss 18451855
dgv1501e1 CNV Complex 17122850
esv2725909 CNV Deletion 23290073
dgv5257n71 CNV Gain 21882294
nsv877490 CNV Gain+Loss 21882294
nsv829723 CNV Gain 17160897
nsv820609 CNV Deletion 20802225
esv24757 CNV Gain+Loss 19812545
dgv1504e1 CNV Complex 17122850
nsv428420 CNV Gain 18775914
nsv822252 CNV Gain 20364138
essv10508 CNV CNV 17122850
nsv433361 CNV Gain 18776910
nsv877492 CNV Gain 21882294
nsv437340 CNV Loss 16327808
dgv1507e1 CNV Complex 17122850
esv2455918 CNV Loss 19546169
esv2725911 CNV Deletion 23290073
dgv1508e1 CNV Complex 17122850
nsv10324 CNV Gain 18304495

Relevant External Links for FAM86HP Gene

HapMap Linkage Disequilibrium report
FAM86HP

Disorders for FAM86HP Gene

No disorders were found for FAM86HP Gene.

No data available for UniProtKB/Swiss-Prot for FAM86HP Gene

Publications for FAM86HP Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for FAM86HP Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM86HP
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM86HP
    • Block miRNA regulation of FAM86HP using miScript Target Protectors

    Sources for FAM86HP Gene

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