Aliases for FAM86FP Gene
Aliases for FAM86FP Gene
External Ids for FAM86FP Gene
- HGNC: 42357
- Entrez Gene: 653113
- Ensembl: ENSG00000164845
Previous GeneCards Identifiers for FAM86FP Gene
- GC12M008384
Summaries for FAM86FP Gene
GeneCards Summary for FAM86FP Gene
FAM86FP (Family With Sequence Similarity 86 Member F, Pseudogene) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM86FP Gene
Genomics for FAM86FP Gene
Regulatory Elements for FAM86FP Gene
Enhancers for FAM86FP Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH12G008241 | 1 | ENCODE | 5.3 | -0.1 | -57 | 2.7 | HDGF PKNOX1 ATF1 AGO1 ARID4B SIN3A YY1 GLIS2 ZNF143 ZNF207 | PHC1 NANOG ENSG00000256552 FAM86FP LINC00612 GC12P008268 |
| GH12G008237 | 1.1 | Ensembl ENCODE | 0.4 | +5.3 | 5348 | 0.4 | ZFP64 ARID4B KLF17 ZNF2 RAD21 ZNF335 ZNF121 ZNF143 ZNF263 ZNF654 | LINC02449 FAM86FP |
| GH12G008242 | 0.4 | Ensembl | 0.7 | +1.7 | 1748 | 0.4 | ESRRA ZNF623 | FAM86FP LINC02449 |
| GH12G008235 | 0.4 | ENCODE | 0.4 | +7.0 | 7008 | 1.1 | BHLHE40 USF2 | LINC02449 FAM86FP |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around FAM86FP on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for FAM86FP Gene
- Chromosome:
- 12
- Start:
- 8,231,049 bp from pter
- End:
- 8,242,948 bp from pter
- Size:
- 11,900 bases
- Orientation:
- Minus strand
Genomic View for FAM86FP Gene
Genes around FAM86FP on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 12p13.31 by Ensembl
- 12p13.31 by Entrez Gene
- 12p13.31 by HGNC
FAM86FP Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for FAM86FP Gene
Proteins for FAM86FP Gene
Post-translational modifications for FAM86FP Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for FAM86FP
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for FAM86FP
- Origene Custom Protein Services for FAM86FP
- Search GeneTex for Proteins for FAM86FP
Assay Products
No data available for DME Specific Peptides for FAM86FP Gene
Domains & Families for FAM86FP Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM86FP Gene
Function for FAM86FP Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for FAM86FP
CRISPR Products
- Browse CRISPR knockouts for FAM86FP
miRNA Products
- Search ViGene Biosciences for FAM86FP
Inhibitory RNA Products
- Search ViGene Biosciences for FAM86FP
Cell Line Products
- Search ViGene Biosciences for FAM86FP
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM86FP Gene
Localization for FAM86FP Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM86FP Gene
Transcripts for FAM86FP Gene
mRNA/cDNA for FAM86FP Gene
- (1) Additional mRNA sequences :
- (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for FAM86FP Gene
CRISPR Products
- Browse CRISPR knockouts for FAM86FP
miRNA Products
- Search ViGene Biosciences for FAM86FP
Inhibitory RNA Products
- Search ViGene Biosciences for FAM86FP
Flow Cytometry Products
Expression for FAM86FP Gene
NURSA nuclear receptor signaling pathways regulating expression of FAM86FP Gene:
FAM86FPSOURCE GeneReport for Unigene cluster for FAM86FP Gene:
Hs.661749
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM86FP Gene
Orthologs for FAM86FP Gene
No data available for Orthologs for FAM86FP Gene
Paralogs for FAM86FP Gene
No data available for Paralogs for FAM86FP Gene
Variants for FAM86FP Gene
| SNP ID | Clin | Chr 12 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000139020 | -- | 8,242,819(+) | AGCCC(C/G)GCGGG | nc-transcript-variant, downstream-variant-500B | |
| rs1000422265 | -- | 8,242,627(+) | CAAGG(C/T)GGTGG | intron-variant, downstream-variant-500B | |
| rs1000494729 | -- | 8,231,900(+) | GTGCC(A/G)CCTGG | nc-transcript-variant | |
| rs1001528208 | -- | 8,238,788(+) | AGCCC(A/G)TCTTA | intron-variant, nc-transcript-variant | |
| rs1001757290 | -- | 8,238,215(+) | CAGGA(C/T)CAATG | intron-variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv1358n100 | CNV | gain | 25217958 |
| dgv1359n100 | CNV | gain | 25217958 |
| dgv1360n100 | CNV | gain | 25217958 |
| dgv2339n54 | CNV | gain | 21841781 |
| dgv247e214 | CNV | gain | 21293372 |
| esv2523633 | CNV | loss | 19546169 |
| esv2668107 | CNV | deletion | 23128226 |
| esv2759877 | CNV | gain+loss | 17122850 |
| esv2760766 | CNV | gain | 21179565 |
| esv2871568 | CNV | duplication | 24192839 |
| esv29886 | CNV | gain+loss | 19812545 |
| esv3628460 | CNV | loss | 21293372 |
| nsv1159957 | CNV | duplication | 26073780 |
| nsv1159958 | CNV | duplication | 26073780 |
| nsv428270 | CNV | gain | 18775914 |
| nsv433419 | CNV | gain | 18776910 |
| nsv557337 | CNV | loss | 21841781 |
| nsv557338 | CNV | gain | 21841781 |
| nsv557339 | CNV | loss | 21841781 |
| nsv826226 | CNV | gain | 20364138 |
| nsv952794 | CNV | deletion | 24416366 |
| nsv973015 | CNV | duplication | 23825009 |
Relevant External Links for FAM86FP Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- FAM86FP
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM86FP Gene
Disorders for FAM86FP Gene
Relevant External Links for FAM86FP
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- FAM86FP
No disorders were found for FAM86FP Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM86FP Gene
Publications for FAM86FP Gene
No publications were found for FAM86FP Gene.
Products for FAM86FP Gene
- Browse R&D Systems for Antibodies
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- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
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- Browse cDNA Clones
- Browse Cell Culture Products
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- Browse Immunoprecipitation Assays
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- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for FAM86FP
- Origene Custom Protein Services for FAM86FP
- Browse OriGene Inhibitory RNA Products For FAM86FP
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for FAM86FP
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For FAM86FP
- GenScript: Custom all cDNA clones Services for FAM86FP
- GenScript Custom Purified and Recombinant Proteins Services for FAM86FP
- GenScript Custom Assay Services for FAM86FP
- GenScript Custom overexpressing Cell Line Services for FAM86FP
- Browse GenScript CRISPR for FAM86FP
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for FAM86FP
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for FAM86FP
- VectorBuilder custom plasmid, inducible vectors for FAM86FP
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for FAM86FP
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for FAM86FP Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer