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Aliases for FAM86EP Gene

Aliases for FAM86EP Gene

  • Family With Sequence Similarity 86, Member E, Pseudogene 2
  • Family With Sequence Similarity 86, Member A Pseudogene 3

External Ids for FAM86EP Gene

Summaries for FAM86EP Gene

GeneCards Summary for FAM86EP Gene

FAM86EP (Family With Sequence Similarity 86, Member E, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM86EP Gene

Genomics for FAM86EP Gene

Genomic Location for FAM86EP Gene

Start:
3,941,760 bp from pter
End:
3,955,421 bp from pter
Size:
13,662 bases
Orientation:
Minus strand

Genomic View for FAM86EP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM86EP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM86EP Gene

No data available for Regulatory Elements for FAM86EP Gene

Proteins for FAM86EP Gene

Post-translational modifications for FAM86EP Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM86EP Gene

Domains for FAM86EP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM86EP Gene

Function for FAM86EP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM86EP Gene

Localization for FAM86EP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM86EP Gene

Pathways for FAM86EP Gene

SuperPathways for FAM86EP Gene

No Data Available

Interacting Proteins for FAM86EP Gene

Gene Ontology (GO) - Biological Process for FAM86EP Gene

None

No data available for Pathways by source for FAM86EP Gene

Transcripts for FAM86EP Gene

mRNA/cDNA for FAM86EP Gene

(2) Additional mRNA sequences :
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM86EP Gene

Family with sequence similarity 86, member A pseudogene:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FAM86EP

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM86EP Gene

No ASD Table

Relevant External Links for FAM86EP Gene

GeneLoc Exon Structure for
FAM86EP
ECgene alternative splicing isoforms for
FAM86EP

Expression for FAM86EP Gene

mRNA expression in normal human tissues for FAM86EP Gene

SOURCE GeneReport for Unigene cluster for FAM86EP Gene Hs.591720

genes like me logo Genes that share expressions with FAM86EP: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for FAM86EP Gene

Orthologs for FAM86EP Gene

Evolution for FAM86EP Gene

ENSEMBL:
Gene Tree for FAM86EP (if available)
TreeFam:
Gene Tree for FAM86EP (if available)

No data available for Orthologs for FAM86EP Gene

Paralogs for FAM86EP Gene

No data available for Paralogs for FAM86EP Gene

Variants for FAM86EP Gene

Sequence variations from dbSNP and Humsavar for FAM86EP Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs2002647 -- 3,954,096(+) GTGCC(A/T)GGCTC intron-variant
rs2004241 -- 3,954,619(-) TAATC(A/G)TTTGC intron-variant
rs3889251 -- 3,954,576(-) GAGAT(A/C)ATTTC intron-variant
rs3892453 -- 3,954,951(-) ACCAC(A/G)TCCTC intron-variant
rs3892781 -- 3,953,872(+) CACCA(C/G)TCAGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM86EP Gene

Variant ID Type Subtype PubMed ID
dgv1566e1 CNV Complex 17122850
esv2726960 CNV Deletion 23290073
nsv517008 CNV Gain+Loss 19592680
nsv878510 CNV Gain 21882294

Relevant External Links for FAM86EP Gene

HapMap Linkage Disequilibrium report
FAM86EP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM86EP Gene

Disorders for FAM86EP Gene

No disorders were found for FAM86EP Gene.

No data available for UniProtKB/Swiss-Prot for FAM86EP Gene

Publications for FAM86EP Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3
  3. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3

Products for FAM86EP Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM86EP
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM86EP
    • Block miRNA regulation of FAM86EP using miScript Target Protectors

    Sources for FAM86EP Gene

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