Aliases for FAM86C2P Gene
Aliases for FAM86C2P Gene
External Ids for FAM86C2P Gene
- HGNC: 42392
- Entrez Gene: 645332
- Ensembl: ENSG00000160172
- UniProtKB: A6NEL3
Previous GeneCards Identifiers for FAM86C2P Gene
- GC11M067561
Summaries for FAM86C2P Gene
GeneCards Summary for FAM86C2P Gene
FAM86C2P (Family With Sequence Similarity 86 Member C2, Pseudogene) is a Pseudogene. GO annotations related to this gene include methyltransferase activity.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM86C2P Gene
Genomics for FAM86C2P Gene
Regulatory Elements for FAM86C2P Gene
Enhancers for FAM86C2P Gene
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around FAM86C2P on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for FAM86C2P Gene
- Chromosome:
- 11
- Start:
- 67,791,648 bp from pter
- End:
- 67,805,336 bp from pter
- Size:
- 13,689 bases
- Orientation:
- Minus strand
Genomic View for FAM86C2P Gene
Genes around FAM86C2P on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11q13.2 by Ensembl
- 11q13.2 by Entrez Gene
- 11q13.2 by HGNC
FAM86C2P Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for FAM86C2P Gene
Proteins for FAM86C2P Gene
-
Protein details for FAM86C2P Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- A6NEL3-F86C2_HUMAN
- Recommended name:
- Putative protein FAM86C2P
- Protein Accession:
- A6NEL3
Protein attributes for FAM86C2P Gene
- Size:
- 165 amino acids
- Molecular mass:
- 18478 Da
- Quaternary structure:
- No Data Available
Post-translational modifications for FAM86C2P Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for FAM86C2P
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for FAM86C2P
- Origene Custom Protein Services for FAM86C2P
- Search GeneTex for Proteins for FAM86C2P
Assay Products
No data available for DME Specific Peptides for FAM86C2P Gene
Domains & Families for FAM86C2P Gene
Graphical View of Domain Structure for InterPro Entry
A6NEL3UniProtKB/Swiss-Prot:
F86C2_HUMAN :- Belongs to the class I-like SAM-binding methyltransferase superfamily. EEF2KMT family.
- Family:
-
- Belongs to the class I-like SAM-binding methyltransferase superfamily. EEF2KMT family.
No data available for Gene Families and Suggested Antigen Peptide Sequences for FAM86C2P Gene
Function for FAM86C2P Gene
Enzyme Numbers (IUBMB) for FAM86C2P Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0008168 | methyltransferase activity | IEA | -- |
Phenotypes for FAM86C2P Gene
- GenomeRNAi human phenotypes for FAM86C2P:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for FAM86C2P
CRISPR Products
- Browse CRISPR knockouts for FAM86C2P
miRNA Products
- Search ViGene Biosciences for FAM86C2P
Inhibitory RNA Products
- Search ViGene Biosciences for FAM86C2P
Cell Line Products
- Search ViGene Biosciences for FAM86C2P
Flow Cytometry Products
No data available for Molecular function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM86C2P Gene
Localization for FAM86C2P Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM86C2P Gene
Pathways & Interactions for FAM86C2P Gene
No Data Available
Interacting Proteins for FAM86C2P Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0032259 | methylation | IEA | -- |
No data available for Pathways by source and SIGNOR curated interactions for FAM86C2P Gene
Transcripts for FAM86C2P Gene
mRNA/cDNA for FAM86C2P Gene
- (4) Additional mRNA sequences :
- (5) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for FAM86C2P Gene
CRISPR Products
- Browse CRISPR knockouts for FAM86C2P
miRNA Products
- Search ViGene Biosciences for FAM86C2P
Inhibitory RNA Products
- Search ViGene Biosciences for FAM86C2P
Flow Cytometry Products
Expression for FAM86C2P Gene
NURSA nuclear receptor signaling pathways regulating expression of FAM86C2P Gene:
FAM86C2PSOURCE GeneReport for Unigene cluster for FAM86C2P Gene:
Hs.535094Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM86C2P Gene
Orthologs for FAM86C2P Gene
No data available for Orthologs for FAM86C2P Gene
Paralogs for FAM86C2P Gene
(4) SIMAP similar genes for FAM86C2P Gene using alignment to 1 proteins:
No data available for Paralogs for FAM86C2P Gene
Variants for FAM86C2P Gene
| SNP ID | Clin | Chr 11 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000055108 | -- | 67,805,685(+) | TGCGT(C/G/T)GGGGC | upstream-variant-2KB | |
| rs1000117234 | -- | 67,801,166(+) | AAGTC(C/T)CCTAT | intron-variant | |
| rs1000292841 | -- | 67,805,477(+) | AGGAT(A/G)AGCGT | upstream-variant-2KB | |
| rs1000632115 | -- | 67,804,725(+) | TGTCT(A/C)TTCCA | intron-variant | |
| rs1001061517 | -- | 67,792,667(+) | TTTCC(A/G)CCGTG | nc-transcript-variant |
Relevant External Links for FAM86C2P Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- FAM86C2P
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM86C2P Gene
Disorders for FAM86C2P Gene
Relevant External Links for FAM86C2P
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- FAM86C2P
No disorders were found for FAM86C2P Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM86C2P Gene
Publications for FAM86C2P Gene
- The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 3 64
- Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 4 64
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
Products for FAM86C2P Gene
- Browse R&D Systems for Antibodies
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- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for FAM86C2P
- VectorBuilder custom plasmid, inducible vectors for FAM86C2P
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for FAM86C2P
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for FAM86C2P Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer