Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FAM85B Gene

Subcategory (RNA class) for FAM85B Gene

ncRNA

Quality Score for this RNA gene is

3

Aliases for FAM85B Gene

  • Family With Sequence Similarity 85 Member B 2 3 5
  • Family With Sequence Similarity 85, Member B 2

External Ids for FAM85B Gene

Previous GeneCards Identifiers for FAM85B Gene

  • GC08U900648
  • GC08M008025
  • GC08M008167

Summaries for FAM85B Gene

GeneCards Summary for FAM85B Gene

FAM85B (Family With Sequence Similarity 85 Member B) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM85B Gene

Genomics for FAM85B Gene

Regulatory Elements for FAM85B Gene

Enhancers for FAM85B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G008323 1.3 Ensembl ENCODE dbSUPER 7.1 -181.0 -181001 2.0 PKNOX1 TBL1XR1 SIN3A RAD21 ZNF207 RELB ETV6 IKZF2 CREM CBFB FAM86B3P CLDN23 ALG1L13P FAM85B PRAG1
GH08G008933 0.8 ENCODE 9.9 -789.4 -789435 0.2 JUN CEBPG ZEB1 RFX5 HIC1 GLI2 ZNF366 SCRT2 FOS SCRT1 FAM90A11P FAM85B GC08M008934 RNU6-682P
GH08G009108 1 ENCODE dbSUPER 5.6 -965.0 -965037 1.5 HDAC1 TAL1 ZKSCAN1 TCF12 GATA2 NCOR1 TRIM24 SMARCE1 MTA2 BHLHE40 RNU7-55P ENSG00000254340 ENSG00000253426 PPP1R3B FAM86B3P RPL10P19 FAM85B ENSG00000197334
GH08G008536 1 Ensembl ENCODE 5.2 -394.0 -393994 2.4 JUN RAD21 RFX5 GATA2 RCOR1 FOS MAFK NFE2L2 TCF7L2 CEBPB PRAG1 FAM86B3P ENSG00000253343 FAM85B ENSG00000255459 ALG1L13P PIR34264 ENSG00000254153
GH08G008530 0.7 ENCODE 6.2 -387.2 -387203 1.6 BCOR SOX13 GTF2F1 NFIB TEAD4 ZMYM3 ZFHX2 ADNP EGR2 GATAD2A FAM86B3P FAM85B ERI1 PIR34264 ENSG00000254153
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAM85B on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM85B Gene

Chromosome:
8
Start:
8,101,125 bp from pter
End:
8,143,741 bp from pter
Size:
42,617 bases
Orientation:
Minus strand

Genomic View for FAM85B Gene

Genes around FAM85B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM85B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM85B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM85B Gene

Proteins for FAM85B Gene

Post-translational modifications for FAM85B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM85B Gene

Domains & Families for FAM85B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM85B Gene

Function for FAM85B Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM85B Gene

Localization for FAM85B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM85B Gene

Pathways & Interactions for FAM85B Gene

SuperPathways for FAM85B Gene

No Data Available

Interacting Proteins for FAM85B Gene

Gene Ontology (GO) - Biological Process for FAM85B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM85B Gene

Drugs & Compounds for FAM85B Gene

No Compound Related Data Available

Transcripts for FAM85B Gene

mRNA/cDNA for FAM85B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM85B Gene

No ASD Table

Relevant External Links for FAM85B Gene

GeneLoc Exon Structure for
FAM85B
ECgene alternative splicing isoforms for
FAM85B

Expression for FAM85B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM85B Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM85B Gene:

FAM85B
genes like me logo Genes that share expression patterns with FAM85B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM85B Gene

Orthologs for FAM85B Gene

Evolution for FAM85B Gene

ENSEMBL:
Gene Tree for FAM85B (if available)
TreeFam:
Gene Tree for FAM85B (if available)

No data available for Orthologs for FAM85B Gene

Paralogs for FAM85B Gene

No data available for Paralogs for FAM85B Gene

Variants for FAM85B Gene

Sequence variations from dbSNP and Humsavar for FAM85B Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs1000275980 -- 8,114,153(+) ACAGA(-/C)TTGTT intron-variant
rs1000627940 -- 8,112,986(+) AATCT(C/G)TTGCT intron-variant
rs1000684086 -- 8,227,410(+) TGGGG(A/G)ACAGA intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1000743012 -- 8,164,356(+) GTCTC(-/AAAAAA)AAAAA intron-variant
rs1000796707 -- 8,176,757(+) GCAGC(A/G)TCTGC intron-variant

Relevant External Links for FAM85B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM85B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM85B Gene

Disorders for FAM85B Gene

No disorders were found for FAM85B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FAM85B Gene

Publications for FAM85B Gene

No publications were found for FAM85B Gene.

Products for FAM85B Gene

Sources for FAM85B Gene

Content
Loading form....