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Aliases for FAM85A Gene

Subcategory (RNA class) for FAM85A Gene

ncRNA

Quality Score for this RNA gene is

3

Aliases for FAM85A Gene

  • Family With Sequence Similarity 85 Member A 2 3
  • Family With Sequence Similarity 85, Member A 2
  • AC145124.1 5

External Ids for FAM85A Gene

Previous GeneCards Identifiers for FAM85A Gene

  • GC08U900641
  • GC08P012052

Summaries for FAM85A Gene

GeneCards Summary for FAM85A Gene

FAM85A (Family With Sequence Similarity 85 Member A) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for FAM85A Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM85A Gene

Genomics for FAM85A Gene

GeneHancer (GH) Regulatory Elements for FAM85A Gene

Promoters and enhancers for FAM85A Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I011696 Promoter/Enhancer 2.6 VISTA EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.7 -477.5 -477456 25.1 PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 GATA4 RPS3AP34 ENSG00000255354 ENSG00000255518 LOC105379241 BLK FAM167A ENSG00000255310 ENSG00000269954 FAM85A
GH08I011856 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 4.4 -323.8 -323760 12.5 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 E2F8 NFYC MEF2D CTSB GC08M011864 PIR52976 FAM167A-AS1 FDFT1 NEIL2 FAM85A
GH08I011799 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 4.5 -382.1 -382075 11.2 FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC ZNF610 GLIS1 FDFT1 PINX1 LOC101929290 NEIL2 CTSB FAM86B2 LOC105379241 BLK RPS3AP34 ENSG00000255122
GH08I011739 Enhancer 1.6 VISTA Ensembl ENCODE dbSUPER 5.3 -444.8 -444780 5.7 ATF1 FOXA2 FEZF1 RAD21 ZNF121 GLIS2 RCOR1 ATF7 CREM EGR2 ENSG00000269918 NEIL2 LOC105379241 FDFT1 ENSG00000269954 FAM85A ENSG00000270154 FAM167A C8orf49 LOC101929490
GH08I011529 Enhancer 1 ENCODE dbSUPER 7.1 -654.5 -654498 5.6 HDGF PKNOX1 SMAD1 BMI1 BATF KLF5 IRF4 ZNF335 ZNF366 ZNF207 LOC105379241 FAM167A BLK ENSG00000255354 ENSG00000255518 FAM85A LOC649352 ENSG00000269918 FAM66A ENSG00000269954
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FAM85A on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM85A Gene

Genomic Locations for FAM85A Gene
chr8:12,186,897-12,204,842
(GRCh38/hg38)
Size:
17,946 bases
Orientation:
Plus strand
chr8:12,051,976-12,056,250
(GRCh37/hg19)

Genomic View for FAM85A Gene

Genes around FAM85A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM85A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM85A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM85A Gene

Proteins for FAM85A Gene

Post-translational modifications for FAM85A Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM85A Gene

Domains & Families for FAM85A Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM85A Gene

Function for FAM85A Gene

Phenotypes From GWAS Catalog for FAM85A Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM85A Gene

Localization for FAM85A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM85A Gene

Pathways & Interactions for FAM85A Gene

SuperPathways for FAM85A Gene

No Data Available

Interacting Proteins for FAM85A Gene

Gene Ontology (GO) - Biological Process for FAM85A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM85A Gene

Drugs & Compounds for FAM85A Gene

No Compound Related Data Available

Transcripts for FAM85A Gene

mRNA/cDNA for FAM85A Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM85A Gene

Family with sequence similarity 85, member A:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM85A Gene

No ASD Table

Relevant External Links for FAM85A Gene

GeneLoc Exon Structure for
FAM85A
ECgene alternative splicing isoforms for
FAM85A

Expression for FAM85A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM85A Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM85A Gene:

FAM85A

SOURCE GeneReport for Unigene cluster for FAM85A Gene:

Hs.745150
genes like me logo Genes that share expression patterns with FAM85A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM85A Gene

Orthologs for FAM85A Gene

Evolution for FAM85A Gene

ENSEMBL:
Gene Tree for FAM85A (if available)
TreeFam:
Gene Tree for FAM85A (if available)

No data available for Orthologs for FAM85A Gene

Paralogs for FAM85A Gene

No data available for Paralogs for FAM85A Gene

Variants for FAM85A Gene

Sequence variations from dbSNP and Humsavar for FAM85A Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1003063594 -- 12,193,445(+) T/TT upstream_transcript_variant
rs1004016892 -- 12,201,591(+) G/A intron_variant
rs1004471664 -- 12,203,226(+) C/G intron_variant
rs1007527214 -- 12,199,583(+) C/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1008079147 -- 12,197,590(+) A/C genic_upstream_transcript_variant, intron_variant

Additional Variant Information for FAM85A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM85A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM85A Gene

Disorders for FAM85A Gene

Additional Disease Information for FAM85A

No disorders were found for FAM85A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM85A Gene

Publications for FAM85A Gene

No publications were found for FAM85A Gene.

Products for FAM85A Gene

Sources for FAM85A Gene

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