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Aliases for FAM83H-AS1 Gene

Subcategory (RNA class) for FAM83H-AS1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for FAM83H-AS1 Gene

  • FAM83H Antisense RNA 1 (Head To Head) 2 3

External Ids for FAM83H-AS1 Gene

Previous GeneCards Identifiers for FAM83H-AS1 Gene

  • GC08P144818

Summaries for FAM83H-AS1 Gene

GeneCards Summary for FAM83H-AS1 Gene

FAM83H-AS1 (FAM83H Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM83H-AS1 Gene

Genomics for FAM83H-AS1 Gene

Genomic Location for FAM83H-AS1 Gene

Start:
143,734,140 bp from pter
End:
143,746,337 bp from pter
Size:
12,198 bases
Orientation:
Plus strand

Genomic View for FAM83H-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM83H-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM83H-AS1 Gene

No data available for Regulatory Elements for FAM83H-AS1 Gene

Proteins for FAM83H-AS1 Gene

Post-translational modifications for FAM83H-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM83H-AS1 Gene

Domains for FAM83H-AS1 Gene

Gene Families for FAM83H-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM83H-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM83H-AS1 Gene

Function for FAM83H-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM83H-AS1 Gene

Localization for FAM83H-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM83H-AS1 Gene

Pathways for FAM83H-AS1 Gene

SuperPathways for FAM83H-AS1 Gene

No Data Available

Interacting Proteins for FAM83H-AS1 Gene

Gene Ontology (GO) - Biological Process for FAM83H-AS1 Gene

None

No data available for Pathways by source for FAM83H-AS1 Gene

Transcripts for FAM83H-AS1 Gene

mRNA/cDNA for FAM83H-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM83H-AS1 Gene

No ASD Table

Relevant External Links for FAM83H-AS1 Gene

GeneLoc Exon Structure for
FAM83H-AS1
ECgene alternative splicing isoforms for
FAM83H-AS1

Expression for FAM83H-AS1 Gene

mRNA expression in normal human tissues for FAM83H-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FAM83H-AS1 Gene

This gene is overexpressed in Esophagus - Mucosa (11.3), Skin - Not Sun Exposed (Suprapubic) (6.6), Skin - Sun Exposed (Lower leg) (5.0), and Vagina (4.8).
genes like me logo Genes that share expressions with FAM83H-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for FAM83H-AS1 Gene

Orthologs for FAM83H-AS1 Gene

Evolution for FAM83H-AS1 Gene

ENSEMBL:
Gene Tree for FAM83H-AS1 (if available)
TreeFam:
Gene Tree for FAM83H-AS1 (if available)

No data available for Orthologs for FAM83H-AS1 Gene

Paralogs for FAM83H-AS1 Gene

No data available for Paralogs for FAM83H-AS1 Gene

Variants for FAM83H-AS1 Gene

Sequence variations from dbSNP and Humsavar for FAM83H-AS1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs1128895 -- 143,746,074(+) TTTCT(A/G)TTCAT nc-transcript-variant
rs4074640 -- 143,743,120(-) CTGGC(A/G)AGGCC intron-variant
rs4074641 -- 143,743,102(-) GTGGC(C/T)ACCCT intron-variant
rs4074642 -- 143,742,865(-) CCCTT(A/C)GCACC intron-variant
rs4875047 -- 143,742,796(+) CTTTC(A/C)CCTTA intron-variant

Relevant External Links for FAM83H-AS1 Gene

HapMap Linkage Disequilibrium report
FAM83H-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM83H-AS1 Gene

Disorders for FAM83H-AS1 Gene

No disorders were found for FAM83H-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for FAM83H-AS1 Gene

Publications for FAM83H-AS1 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for FAM83H-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM83H-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM83H-AS1
    • Block miRNA regulation of FAM83H-AS1 using miScript Target Protectors

    Sources for FAM83H-AS1 Gene

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