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FAM74A6 Gene(RNA Gene)

Family With Sequence Similarity 74 Member A6

GCID:
GC09P060930
GIFtS:
18
Genes Participants
UDN Logo

Aliases for FAM74A6 Gene

Subcategory (RNA class) for FAM74A6 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM74A6 Gene

  • Family With Sequence Similarity 74 Member A6 2 3 5
  • Family With Sequence Similarity 74, Member A6 2
  • FAM74A4 FAM74A6 4

External Ids for FAM74A6 Gene

Previous GeneCards Identifiers for FAM74A6 Gene

  • GC09P041509
  • GC09P041515

Summaries for FAM74A6 Gene

GeneCards Summary for FAM74A6 Gene

FAM74A6 (Family With Sequence Similarity 74 Member A6) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM74A6 Gene

Genomics for FAM74A6 Gene

Products:

  1. Regulatory Element

Genomic Location for FAM74A6 Gene

Chromosome:
9
Start:
60,929,774 bp from pter
End:
60,936,746 bp from pter
Size:
6,973 bases
Orientation:
Plus strand

Genomic View for FAM74A6 Gene

Genes around FAM74A6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM74A6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM74A6 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for FAM74A6 Gene

No data available for Regulatory Elements for FAM74A6 Gene

Proteins for FAM74A6 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for FAM74A6 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5TZK3-FAM74_HUMAN
    Recommended name:
    Protein FAM74A4/A6
    Protein Accession:
    Q5TZK3
    Secondary Accessions:
    • A6NH89
    • Q6ZSU6

    Protein attributes for FAM74A6 Gene

    Size:
    123 amino acids
    Molecular mass:
    14773 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM74A6 Gene

Post-translational modifications for FAM74A6 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for FAM74A6 Gene

Domains & Families for FAM74A6 Gene

Protein Domains for FAM74A6 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q5TZK3

UniProtKB/Swiss-Prot:

FAM74_HUMAN :
  • Belongs to the FAM74 family.
Family:
  • Belongs to the FAM74 family.
genes like me logo Genes that share domains with FAM74A6: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for FAM74A6 Gene

Function for FAM74A6 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM74A6 Gene

Localization for FAM74A6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM74A6 Gene

Pathways & Interactions for FAM74A6 Gene

No data available for Pathways by source and SIGNOR curated interactions for FAM74A6 Gene

Drugs & Compounds for FAM74A6 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for FAM74A6 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for FAM74A6 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM74A6 Gene

No ASD Table

Relevant External Links for FAM74A6 Gene

GeneLoc Exon Structure for
FAM74A6
ECgene alternative splicing isoforms for
FAM74A6

Expression for FAM74A6 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM74A6 Gene

mRNA expression in normal human tissues for FAM74A6 Gene
mRNA expression by GTEx for FAM74A6 Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM74A6 Gene:

FAM74A6
genes like me logo Genes that share expression patterns with FAM74A6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM74A6 Gene

Orthologs for FAM74A6 Gene

Evolution for FAM74A6 Gene

ENSEMBL:
Gene Tree for FAM74A6 (if available)
TreeFam:
Gene Tree for FAM74A6 (if available)

No data available for Orthologs for FAM74A6 Gene

Paralogs for FAM74A6 Gene

(4) SIMAP similar genes for FAM74A6 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM74A6: view

No data available for Paralogs for FAM74A6 Gene

Variants for FAM74A6 Gene

Sequence variations from dbSNP and Humsavar for FAM74A6 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1004068815 -- 60,933,287(+) TAGTG(-/T)TCGCA intron-variant
rs1029777882 -- 60,932,944(+) CAAGA(C/T)GACAA intron-variant
rs112377314 -- 60,929,431(-) CTGTA(G/T)ACCCA upstream-variant-2KB
rs113375111 -- 60,936,012(+) TGCCA(G/T)TGCAC downstream-variant-500B
rs113935894 -- 60,932,503(+) ATCCA(C/T)ATATA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM74A6 Gene

Variant ID Type Subtype PubMed ID
dgv12693n54 CNV loss 21841781
esv2837124 CNV deletion 24192839
esv3620475 CNV loss 21293372
esv3620476 CNV gain 21293372
esv3891672 CNV gain+loss 25118596
nsv1075628 CNV deletion 25765185
nsv1119578 CNV deletion 24896259
nsv1126889 CNV deletion 24896259
nsv1137635 CNV deletion 24896259
nsv1144261 CNV deletion 24896259
nsv1145210 CNV deletion 24896259
nsv831565 CNV gain+loss 17160897
nsv972324 CNV duplication 23825009
nsv972697 CNV duplication 23825009
nsv972712 CNV duplication 23825009

Relevant External Links for FAM74A6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM74A6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM74A6 Gene

Disorders for FAM74A6 Gene

Relevant External Links for FAM74A6

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM74A6

No disorders were found for FAM74A6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM74A6 Gene

Publications for FAM74A6 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 64
  2. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 4 64

Products for FAM74A6 Gene

Sources for FAM74A6 Gene

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