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Aliases for FAM72C Gene

Aliases for FAM72C Gene

  • Family With Sequence Similarity 72, Member C 2 3
  • Protein FAM72C 3
  • RP5-998N21.9 3

External Ids for FAM72C Gene

Previous GeneCards Identifiers for FAM72C Gene

  • GC01U901175
  • GC01M149438

Summaries for FAM72C Gene

GeneCards Summary for FAM72C Gene

FAM72C (Family With Sequence Similarity 72, Member C) is a Protein Coding gene. An important paralog of this gene is FAM72D.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM72C Gene

Genomics for FAM72C Gene

Genomic Location for FAM72C Gene

Start:
143,944,179 bp from pter
End:
143,972,006 bp from pter
Size:
27,828 bases
Orientation:
Minus strand

Genomic View for FAM72C Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM72C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM72C Gene

No data available for Regulatory Elements for FAM72C Gene

Proteins for FAM72C Gene

  • Protein details for FAM72C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    H0Y354-FA72C_HUMAN
    Recommended name:
    Protein FAM72C
    Protein Accession:
    H0Y354
    Secondary Accessions:

    Protein attributes for FAM72C Gene

    Size:
    149 amino acids
    Molecular mass:
    16730 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM72C Gene

Proteomics data for FAM72C Gene at MOPED

Post-translational modifications for FAM72C Gene

No Post-translational modifications

Other Protein References for FAM72C Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM72C Gene

Domains for FAM72C Gene

Protein Domains for FAM72C Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for FAM72C Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

H0Y354

UniProtKB/Swiss-Prot:

FA72C_HUMAN :
  • H0Y354
Family:
  • Belongs to the FAM72 family.
genes like me logo Genes that share domains with FAM72C: view

No data available for Gene Families for FAM72C Gene

Function for FAM72C Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM72C Gene

Localization for FAM72C Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM72C Gene COMPARTMENTS Subcellular localization image for FAM72C gene
Compartment Confidence
extracellular 3
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for FAM72C Gene

Pathways for FAM72C Gene

SuperPathways for FAM72C Gene

No Data Available

Interacting Proteins for FAM72C Gene

Gene Ontology (GO) - Biological Process for FAM72C Gene

None

No data available for Pathways by source for FAM72C Gene

Transcripts for FAM72C Gene

mRNA/cDNA for FAM72C Gene

(2) Additional mRNA sequences :
(3) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM72C Gene

Family with sequence similarity 72, member C:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM72C Gene

No ASD Table

Relevant External Links for FAM72C Gene

GeneLoc Exon Structure for
FAM72C
ECgene alternative splicing isoforms for
FAM72C

Expression for FAM72C Gene

mRNA expression in normal human tissues for FAM72C Gene

SOURCE GeneReport for Unigene cluster for FAM72C Gene Hs.568238

genes like me logo Genes that share expressions with FAM72C: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for FAM72C Gene

Orthologs for FAM72C Gene

Evolution for FAM72C Gene

ENSEMBL:
Gene Tree for FAM72C (if available)
TreeFam:
Gene Tree for FAM72C (if available)

No data available for Orthologs for FAM72C Gene

Paralogs for FAM72C Gene

Paralogs for FAM72C Gene

Selected SIMAP similar genes for FAM72C Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with FAM72C: view

Variants for FAM72C Gene

Sequence variations from dbSNP and Humsavar for FAM72C Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs910733 -- 143,958,531(+) CTTTT(C/T)GTGTT intron-variant
rs910734 -- 143,958,568(+) CCCCA(C/T)CCCCA intron-variant
rs910736 -- 143,958,871(+) TATAA(A/G)GCTTG intron-variant
rs910739 -- 143,959,637(+) AAAAC(A/T)TGCAT intron-variant
rs1077771 -- 143,958,272(-) atact(C/G)tccag intron-variant

Relevant External Links for FAM72C Gene

HapMap Linkage Disequilibrium report
FAM72C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM72C Gene

Disorders for FAM72C Gene

No disorders were found for FAM72C Gene.

No data available for UniProtKB/Swiss-Prot for FAM72C Gene

Publications for FAM72C Gene

  1. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 4

Products for FAM72C Gene

Sources for FAM72C Gene

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