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Aliases for FAM66E Gene

Subcategory (RNA class) for FAM66E Gene

antisense

Quality Score for this RNA gene is

3

Aliases for FAM66E Gene

  • Family With Sequence Similarity 66, Member E 2 3

External Ids for FAM66E Gene

ORGUL Members for FAM66E Gene

Summaries for FAM66E Gene

GeneCards Summary for FAM66E Gene

FAM66E (Family With Sequence Similarity 66, Member E) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM66E Gene

Genomics for FAM66E Gene

Genomic Location for FAM66E Gene

Start:
7,955,013 bp from pter
End:
8,008,755 bp from pter
Size:
53,743 bases
Orientation:
Plus strand

Genomic View for FAM66E Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM66E Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM66E Gene

No data available for Regulatory Elements for FAM66E Gene

Proteins for FAM66E Gene

  • Protein details for FAM66E Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C841-FA66E_HUMAN
    Recommended name:
    Putative protein FAM66E
    Protein Accession:
    P0C841
    Secondary Accessions:

    Protein attributes for FAM66E Gene

    Size:
    47 amino acids
    Molecular mass:
    5233 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM66E Gene

Proteomics data for FAM66E Gene at MOPED

Post-translational modifications for FAM66E Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM66E Gene

Domains for FAM66E Gene

Gene Families for FAM66E Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for FAM66E Gene

ProtoNet:

UniProtKB/Swiss-Prot:

FA66E_HUMAN
Family:
  • Belongs to the FAM66 family.:
    • P0C841
genes like me logo Genes that share domains with FAM66E: view

Function for FAM66E Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM66E Gene

Localization for FAM66E Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM66E Gene COMPARTMENTS Subcellular localization image for FAM66E gene
Compartment Confidence
cytosol 1
nucleus 1

No data available for Gene Ontology (GO) - Cellular Components for FAM66E Gene

Pathways for FAM66E Gene

SuperPathways for FAM66E Gene

No Data Available

Interacting Proteins for FAM66E Gene

Gene Ontology (GO) - Biological Process for FAM66E Gene

None

No data available for Pathways by source for FAM66E Gene

Transcripts for FAM66E Gene

mRNA/cDNA for FAM66E Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM66E Gene

No ASD Table

Relevant External Links for FAM66E Gene

GeneLoc Exon Structure for
FAM66E
ECgene alternative splicing isoforms for
FAM66E

Expression for FAM66E Gene

mRNA expression in normal human tissues for FAM66E Gene

genes like me logo Genes that share expressions with FAM66E: view

Orthologs for FAM66E Gene

Evolution for FAM66E Gene

ENSEMBL:
Gene Tree for FAM66E (if available)
TreeFam:
Gene Tree for FAM66E (if available)

No data available for Orthologs for FAM66E Gene

Paralogs for FAM66E Gene

No data available for Paralogs for FAM66E Gene

Variants for FAM66E Gene

Sequence variations from dbSNP and Humsavar for FAM66E Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs9720860 -- 7,991,801(+) TAAAT(A/C)TGATT intron-variant
rs28414840 -- 7,996,371(+) ATGAT(A/G)TAGTG intron-variant
rs28434282 -- 7,957,709(+) TTTGA(C/G)ACCAG intron-variant
rs28467774 -- 7,995,929(+) GAGCC(A/G)TCCTG intron-variant
rs28491614 -- 7,994,874(+) TTGAC(G/T)GAGTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM66E Gene

Variant ID Type Subtype PubMed ID
nsv428194 CNV Gain+Loss 18775914
dgv2191e1 CNV Complex 17122850
nsv515968 CNV Gain+Loss 19592680
nsv821656 CNV Gain 15273396
dgv2192e1 CNV Complex 17122850
nsv510977 CNV Complex 20534489
dgv7659n71 CNV Gain 21882294
dgv7662n71 CNV Gain 21882294
nsv8281 CNV Gain+Loss 18304495
dgv7664n71 CNV Loss 21882294
nsv471650 CNV Gain+Loss 15918152
dgv2195e1 CNV Complex 17122850
dgv7670n71 CNV Loss 21882294
dgv7673n71 CNV Gain+Loss 21882294
esv2752265 CNV Gain 17911159
dgv7679n71 CNV Gain 21882294
esv2752266 CNV Loss 17911159
nsv508496 CNV Loss 20534489
dgv7682n71 CNV Gain 21882294
esv25631 CNV Gain+Loss 19812545
dgv7683n71 CNV Gain+Loss 21882294
dgv7684n71 CNV Loss 21882294
dgv7685n71 CNV Gain 21882294
nsv890270 CNV Loss 21882294
dgv7686n71 CNV Gain 21882294
dgv7689n71 CNV Gain 21882294
nsv433398 CNV Gain 18776910
dgv7691n71 CNV Gain 21882294
dgv7695n71 CNV Gain 21882294
dgv7697n71 CNV Gain 21882294
dgv10n29 CNV Gain 16826518
nsv471651 CNV Gain+Loss 15918152
nsv890322 CNV Loss 21882294
dgv1265e199 CNV Deletion 23128226
esv1000987 CNV Gain 20482838
nsv821327 CNV Deletion 20802225
esv2422039 CNV Deletion 20811451
nsv469790 CNV Loss 16826518
essv20225 CNV CNV 17122850
nsv442400 CNV CNV 18776908
nsv515104 CNV Complex 21397061
nsv890323 CNV Gain 21882294
dgv7698n71 CNV Gain 21882294

Relevant External Links for FAM66E Gene

HapMap Linkage Disequilibrium report
FAM66E

Disorders for FAM66E Gene

No disorders were found for FAM66E Gene.

No data available for UniProtKB/Swiss-Prot for FAM66E Gene

Publications for FAM66E Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4

Products for FAM66E Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM66E
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM66E
    • Block miRNA regulation of FAM66E using miScript Target Protectors

    Sources for FAM66E Gene

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