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Aliases for FAM66A Gene

Subcategory (RNA class) for FAM66A Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM66A Gene

  • Family With Sequence Similarity 66 Member A 2 3 5
  • Family With Sequence Similarity 66, Member A 2

External Ids for FAM66A Gene

Previous GeneCards Identifiers for FAM66A Gene

  • GC08U900595
  • GC08P012266
  • GC08P012219
  • GC08P010909

Summaries for FAM66A Gene

GeneCards Summary for FAM66A Gene

FAM66A (Family With Sequence Similarity 66 Member A) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM66A Gene

Genomics for FAM66A Gene

Regulatory Elements for FAM66A Gene

Promoters for FAM66A Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around FAM66A on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM66A Gene

Chromosome:
8
Start:
12,362,019 bp from pter
End:
12,411,001 bp from pter
Size:
48,983 bases
Orientation:
Plus strand

Genomic View for FAM66A Gene

Genes around FAM66A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM66A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM66A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM66A Gene

Proteins for FAM66A Gene

Post-translational modifications for FAM66A Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM66A Gene

Domains & Families for FAM66A Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM66A Gene

Function for FAM66A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM66A Gene

Localization for FAM66A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM66A Gene

Pathways & Interactions for FAM66A Gene

SuperPathways for FAM66A Gene

No Data Available

Interacting Proteins for FAM66A Gene

Gene Ontology (GO) - Biological Process for FAM66A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM66A Gene

Drugs & Compounds for FAM66A Gene

No Compound Related Data Available

Transcripts for FAM66A Gene

mRNA/cDNA for FAM66A Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM66A Gene

No ASD Table

Relevant External Links for FAM66A Gene

GeneLoc Exon Structure for
FAM66A
ECgene alternative splicing isoforms for
FAM66A

Expression for FAM66A Gene

mRNA expression in normal human tissues for FAM66A Gene

genes like me logo Genes that share expression patterns with FAM66A: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM66A Gene

Orthologs for FAM66A Gene

Evolution for FAM66A Gene

ENSEMBL:
Gene Tree for FAM66A (if available)
TreeFam:
Gene Tree for FAM66A (if available)

No data available for Orthologs for FAM66A Gene

Paralogs for FAM66A Gene

No data available for Paralogs for FAM66A Gene

Variants for FAM66A Gene

Sequence variations from dbSNP and Humsavar for FAM66A Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs2739948 -- 12,362,090(+) TCAGG(A/G)AGGCG nc-transcript-variant
rs2739950 -- 12,362,891(+) TCAGC(A/G)CAGCC intron-variant
rs2739957 -- 12,374,914(+) ATCCC(A/G)TGGCA intron-variant
rs2739958 -- 12,375,025(+) AATGC(C/T)TTTTT intron-variant
rs2739959 -- 12,375,112(+) TGTGA(A/G)GGCTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM66A Gene

Variant ID Type Subtype PubMed ID
nsv516685 CNV Gain+Loss 19592680
nsv428195 CNV Gain 18775914
dgv2199e1 CNV Complex 17122850
dgv2200e1 CNV Complex 17122850
esv2736614 CNV Deletion 23290073
dgv1270e199 CNV Deletion 23128226
dgv244e55 CNV Gain 17911159
nsv890374 CNV Gain 21882294
nsv8288 CNV Gain+Loss 18304495
dgv2203e1 CNV Complex 17122850
dgv2204e1 CNV Complex 17122850
nsv821657 CNV Loss 15273396
esv25198 CNV Gain+Loss 19812545
nsv831234 CNV Loss 17160897
nsv890376 CNV Loss 21882294
nsv890378 CNV Gain+Loss 21882294
nsv890380 CNV Gain 21882294
dgv2207e1 CNV Complex 17122850
nsv469553 CNV Loss 16826518
nsv471652 CNV Gain+Loss 15918152
esv2672709 CNV Deletion 23128226
nsv890381 CNV Gain 21882294
dgv7706n71 CNV Gain 21882294
nsv821220 CNV Deletion 20802225
nsv442421 CNV CNV 18776908
nsv824539 CNV Gain 20364138
dgv2208e1 CNV Complex 17122850
dgv2209e1 CNV Complex 17122850
dgv245e55 CNV Gain 17911159
dgv2210e1 CNV Complex 17122850
dgv246e55 CNV Gain 17911159
nsv824540 CNV Loss 20364138
dgv1172n67 CNV Gain 20364138
esv993011 CNV Gain 20482838
nsv831235 CNV Loss 17160897
nsv515064 CNV Complex 21397061
esv32998 CNV Gain+Loss 17666407
nsv438036 CNV Loss 16468122
esv2276035 CNV Deletion 18987734
esv2736623 CNV Deletion 23290073
nsv515065 CNV Complex 21397061
dgv140n17 CNV Loss 16327808
nsv511387 CNV Loss 21212237
dgv2211e1 CNV Complex 17122850
nsv515066 CNV Complex 21397061

Relevant External Links for FAM66A Gene

HapMap Linkage Disequilibrium report
FAM66A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM66A Gene

Disorders for FAM66A Gene

Relevant External Links for FAM66A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM66A

No disorders were found for FAM66A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM66A Gene

Publications for FAM66A Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3

Products for FAM66A Gene

Sources for FAM66A Gene

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