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Aliases for FAM58BP Gene

Aliases for FAM58BP Gene

  • Family With Sequence Similarity 58, Member B, Pseudogene 2
  • FAM58B 3 4
  • Family With Sequence Similarity 58, Member B 2
  • Putative Cyclin-Related Protein FAM58B 3
  • Cyclin-Related Protein FAM58B 3

External Ids for FAM58BP Gene

Previous Symbols for FAM58BP Gene

  • FAM58B

Summaries for FAM58BP Gene

GeneCards Summary for FAM58BP Gene

FAM58BP (Family With Sequence Similarity 58, Member B, Pseudogene) is a Pseudogene. GO annotations related to this gene include protein kinase binding.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM58BP Gene

Genomics for FAM58BP Gene

Genomic Location for FAM58BP Gene

Start:
200,213,532 bp from pter
End:
200,214,774 bp from pter
Size:
1,243 bases
Orientation:
Plus strand

Genomic View for FAM58BP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM58BP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM58BP Gene

No data available for Regulatory Elements for FAM58BP Gene

Proteins for FAM58BP Gene

  • Protein details for FAM58BP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C7Q3-FA58B_HUMAN
    Recommended name:
    Putative cyclin-related protein FAM58B
    Protein Accession:
    P0C7Q3
    Secondary Accessions:

    Protein attributes for FAM58BP Gene

    Size:
    252 amino acids
    Molecular mass:
    28609 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM58BP Gene

Proteomics data for FAM58BP Gene at MOPED

Post-translational modifications for FAM58BP Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM58BP Gene

Domains for FAM58BP Gene

Protein Domains for FAM58BP Gene

UniProtKB/Swiss-Prot:

FA58B_HUMAN
Family:
  • Belongs to the cyclin family. Cyclin-like FAM58 subfamily.:
    • P0C7Q3
genes like me logo Genes that share domains with FAM58BP: view

No data available for Gene Families for FAM58BP Gene

Function for FAM58BP Gene

Gene Ontology (GO) - Molecular Function for FAM58BP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0019901 protein kinase binding IEA --
genes like me logo Genes that share ontologies with FAM58BP: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM58BP Gene

Localization for FAM58BP Gene

No data available for Gene Ontology (GO) - Cellular Components for FAM58BP Gene

Pathways for FAM58BP Gene

SuperPathways for FAM58BP Gene

No Data Available

Interacting Proteins for FAM58BP Gene

Gene Ontology (GO) - Biological Process for FAM58BP Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with FAM58BP: view

No data available for Pathways by source for FAM58BP Gene

Transcripts for FAM58BP Gene

mRNA/cDNA for FAM58BP Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM58BP Gene

No ASD Table

Relevant External Links for FAM58BP Gene

GeneLoc Exon Structure for
FAM58BP
ECgene alternative splicing isoforms for
FAM58BP

Expression for FAM58BP Gene

mRNA expression in normal human tissues for FAM58BP Gene

mRNA differential expression in normal tissues according to GTEx for FAM58BP Gene

This gene is overexpressed in Testis (46.3).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM58BP Gene

mRNA Expression by UniProt/SwissProt for FAM58BP Gene

P0C7Q3-FA58B_HUMAN
Tissue specificity: Expressed in normal breast, breast cancer cell lines, healthy retina and retinoblastoma.
genes like me logo Genes that share expressions with FAM58BP: view

Orthologs for FAM58BP Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for FAM58BP Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Fam58b 16
Species with no ortholog for FAM58BP:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM58BP Gene

ENSEMBL:
Gene Tree for FAM58BP (if available)
TreeFam:
Gene Tree for FAM58BP (if available)

Paralogs for FAM58BP Gene

Selected SIMAP similar genes for FAM58BP Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM58BP: view

No data available for Paralogs for FAM58BP Gene

Variants for FAM58BP Gene

Sequence variations from dbSNP and Humsavar for FAM58BP Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
VAR_044332 -
VAR_044333 -

Structural Variations from Database of Genomic Variants (DGV) for FAM58BP Gene

Variant ID Type Subtype PubMed ID
nsv873093 CNV Gain 21882294

Relevant External Links for FAM58BP Gene

HapMap Linkage Disequilibrium report
FAM58BP

Disorders for FAM58BP Gene

No disorders were found for FAM58BP Gene.

No data available for UniProtKB/Swiss-Prot for FAM58BP Gene

Publications for FAM58BP Gene

  1. KIF14 is a candidate oncogene in the 1q minimal region of genomic gain in multiple cancers. (PMID: 15897902) Corson T.W. … Gallie B.L. (Oncogene 2005) 2 3 4
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 4
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FAM58BP Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM58BP
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM58BP
    • Block miRNA regulation of FAM58BP using miScript Target Protectors

    Sources for FAM58BP Gene

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