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Aliases for FAM41AY1 Gene

Subcategory (RNA class) for FAM41AY1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for FAM41AY1 Gene

  • Family With Sequence Similarity 41, Member A, Y-Linked 1 2 3
  • Family With Sequence Similarity 41, Member A, Y-Linked 2
  • FAM41AY 3

External Ids for FAM41AY1 Gene

ORGUL Members for FAM41AY1 Gene

Previous HGNC Symbols for FAM41AY1 Gene

  • FAM41AY

Previous GeneCards Identifiers for FAM41AY1 Gene

  • GC0YM020551
  • GC0YP019613
  • GC0YP014095

Summaries for FAM41AY1 Gene

GeneCards Summary for FAM41AY1 Gene

FAM41AY1 (Family With Sequence Similarity 41, Member A, Y-Linked 1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM41AY1 Gene

Genomics for FAM41AY1 Gene

Genomic Location for FAM41AY1 Gene

Start:
17,500,958 bp from pter
End:
17,516,742 bp from pter
Size:
15,785 bases
Orientation:
Plus strand

Genomic View for FAM41AY1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM41AY1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM41AY1 Gene

No data available for Regulatory Elements for FAM41AY1 Gene

Proteins for FAM41AY1 Gene

Post-translational modifications for FAM41AY1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM41AY1 Gene

Domains for FAM41AY1 Gene

Gene Families for FAM41AY1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM41AY1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM41AY1 Gene

Function for FAM41AY1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM41AY1 Gene

Localization for FAM41AY1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM41AY1 Gene

Pathways for FAM41AY1 Gene

SuperPathways for FAM41AY1 Gene

No Data Available

Interacting Proteins for FAM41AY1 Gene

Gene Ontology (GO) - Biological Process for FAM41AY1 Gene

None

No data available for Pathways by source for FAM41AY1 Gene

Transcripts for FAM41AY1 Gene

mRNA/cDNA for FAM41AY1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FAM41AY1

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM41AY1 Gene

No ASD Table

Relevant External Links for FAM41AY1 Gene

GeneLoc Exon Structure for
FAM41AY1
ECgene alternative splicing isoforms for
FAM41AY1

Expression for FAM41AY1 Gene

SOURCE GeneReport for Unigene cluster for FAM41AY1 Gene Hs.742348

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for FAM41AY1 Gene

Orthologs for FAM41AY1 Gene

Evolution for FAM41AY1 Gene

ENSEMBL:
Gene Tree for FAM41AY1 (if available)
TreeFam:
Gene Tree for FAM41AY1 (if available)

No data available for Orthologs for FAM41AY1 Gene

Paralogs for FAM41AY1 Gene

No data available for Paralogs for FAM41AY1 Gene

Variants for FAM41AY1 Gene

Sequence variations from dbSNP and Humsavar for FAM41AY1 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs344173 -- 17,513,408(-) GGAAA(A/G)AATAA intron-variant
rs111648117 -- 17,499,470(+) TGGGA(C/T)TACAG upstream-variant-2KB
rs113447496 -- 17,499,376(+) CACCC(A/T)GGCTG upstream-variant-2KB
rs200745139 -- 17,509,152(+) GGATA(A/G)AAGAA intron-variant
rs368460916 -- 17,500,923(+) CTTTT(G/T)CAAAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM41AY1 Gene

Variant ID Type Subtype PubMed ID
esv1670141 OTHER Inversion 17803354

Relevant External Links for FAM41AY1 Gene

HapMap Linkage Disequilibrium report
FAM41AY1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM41AY1 Gene

Disorders for FAM41AY1 Gene

No disorders were found for FAM41AY1 Gene.

No data available for UniProtKB/Swiss-Prot for FAM41AY1 Gene

Publications for FAM41AY1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3

Products for FAM41AY1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM41AY1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM41AY1
    • Block miRNA regulation of FAM41AY1 using miScript Target Protectors

    Sources for FAM41AY1 Gene

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