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Aliases for FAM35BP Gene

Aliases for FAM35BP Gene

  • Family With Sequence Similarity 35 Member B, Pseudogene 2 5
  • Family With Sequence Similarity 35, Member E, Pseudogene 2 3
  • Family With Sequence Similarity 35, Member B, Pseudogene 2
  • Family With Sequence Similarity 35, Member A Pseudogene 3
  • Family With Sequence Similarity 35, Member B 2
  • BA38L15.1 3
  • FAM35EP 3
  • FAM35B 3

External Ids for FAM35BP Gene

Previous HGNC Symbols for FAM35BP Gene

  • FAM35B
  • FAM35EP

Previous GeneCards Identifiers for FAM35BP Gene

  • GC10P046899

Summaries for FAM35BP Gene

GeneCards Summary for FAM35BP Gene

FAM35BP (Family With Sequence Similarity 35 Member B, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM35BP Gene

Genomics for FAM35BP Gene

Regulatory Elements for FAM35BP Gene

Enhancers for FAM35BP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G046091 1.7 FANTOM5 Ensembl ENCODE dbSUPER 10 +557.4 557408 7.0 ELF3 MLX ARID4B INSM2 DMAP1 RAD21 RARA GLIS2 RELB IKZF2 MSMB NCOA4 AGAP7P BMS1P1 FAM35BP TIMM23 GC10M046105 PIR51454 RPL23AP61
GH10G046522 1.4 Ensembl ENCODE 10 +127.3 127327 3.6 HDGF ARNT SIN3A YBX1 ZNF2 ZBTB7B ZNF766 ZNF207 ZNF143 FOS PARGP1 AGAP4 AGAP9 BMS1P1 WASHC2C FAM21FP LOC105378289 FAM35BP ANXA8L1 PTPN20
GH10G046670 0.4 Ensembl 0.4 -18.7 -18676 0.2 EP300 FAM35BP LOC101927584
GH10G046660 0.2 Ensembl 0.4 -8.9 -8876 0.2 FAM35BP LOC101927584
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAM35BP on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM35BP Gene

Chromosome:
10
Start:
46,610,472 bp from pter
End:
46,652,025 bp from pter
Size:
41,554 bases
Orientation:
Minus strand

Genomic View for FAM35BP Gene

Genes around FAM35BP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM35BP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM35BP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM35BP Gene

Proteins for FAM35BP Gene

Post-translational modifications for FAM35BP Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM35BP Gene

Domains & Families for FAM35BP Gene

Suggested Antigen Peptide Sequences for FAM35BP Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FAM35BP Gene

Function for FAM35BP Gene

genes like me logo Genes that share phenotypes with FAM35BP: view

Animal Model Products

miRNA for FAM35BP Gene

miRTarBase miRNAs that target FAM35BP

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for FAM35BP Gene

Localization for FAM35BP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM35BP Gene

Pathways & Interactions for FAM35BP Gene

SuperPathways for FAM35BP Gene

No Data Available

Interacting Proteins for FAM35BP Gene

Gene Ontology (GO) - Biological Process for FAM35BP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM35BP Gene

Drugs & Compounds for FAM35BP Gene

No Compound Related Data Available

Transcripts for FAM35BP Gene

mRNA/cDNA for FAM35BP Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM35BP Gene

Family with sequence similarity 35, member A pseudogene:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM35BP Gene

ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b
SP1:
SP2: -

Relevant External Links for FAM35BP Gene

GeneLoc Exon Structure for
FAM35BP
ECgene alternative splicing isoforms for
FAM35BP

Expression for FAM35BP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM35BP Gene

mRNA differential expression in normal tissues according to GTEx for FAM35BP Gene

This gene is overexpressed in Liver (x6.6).

NURSA nuclear receptor signaling pathways regulating expression of FAM35BP Gene:

FAM35BP

SOURCE GeneReport for Unigene cluster for FAM35BP Gene:

Hs.594331
genes like me logo Genes that share expression patterns with FAM35BP: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM35BP Gene

Orthologs for FAM35BP Gene

Evolution for FAM35BP Gene

ENSEMBL:
Gene Tree for FAM35BP (if available)
TreeFam:
Gene Tree for FAM35BP (if available)

No data available for Orthologs for FAM35BP Gene

Paralogs for FAM35BP Gene

No data available for Paralogs for FAM35BP Gene

Variants for FAM35BP Gene

Sequence variations from dbSNP and Humsavar for FAM35BP Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs10540793 -- 46,620,665(-) AAAAA(-/A)GCTGG intron-variant
rs1059769 -- 46,634,655(-) TTTAT(C/T)GGCAT intron-variant
rs10797302 -- 46,648,298(-) agctc(C/T)gcctc intron-variant
rs10797303 -- 46,648,141(-) tgatc(C/T)gcccg intron-variant
rs10909636 -- 46,619,298(-) TACAT(G/T)TTTGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM35BP Gene

Variant ID Type Subtype PubMed ID
dgv440n106 CNV duplication 24896259
dgv734n100 CNV gain 25217958
dgv737n100 CNV loss 25217958
dgv738n100 CNV loss 25217958
dgv739n100 CNV gain 25217958
dgv740n100 CNV gain+loss 25217958
dgv742n100 CNV loss 25217958
dgv743n100 CNV gain 25217958
dgv746n100 CNV gain 25217958
dgv747n100 CNV gain+loss 25217958
dgv748n100 CNV gain 25217958
dgv749n100 CNV gain+loss 25217958
dgv750n100 CNV loss 25217958
dgv751n100 CNV gain 25217958
dgv752n100 CNV loss 25217958
dgv753n100 CNV gain 25217958
dgv8n68 CNV gain 17160897
esv2736152 CNV deletion 23290073
esv3584617 CNV loss 24956385
nsv1037583 CNV loss 25217958
nsv1041409 CNV loss 25217958
nsv1042820 CNV gain+loss 25217958
nsv1047710 CNV gain+loss 25217958
nsv1050225 CNV gain+loss 25217958
nsv1069042 CNV deletion 25765185
nsv1069043 CNV deletion 25765185
nsv1118167 CNV deletion 24896259
nsv1118474 CNV duplication 24896259
nsv1118475 CNV duplication 24896259
nsv1150494 CNV duplication 26484159
nsv550721 CNV loss 21841781
nsv550722 CNV gain 21841781
nsv947927 CNV duplication 23825009
nsv947928 CNV duplication 23825009
nsv951572 CNV deletion 24416366
nsv951573 CNV duplication 24416366
nsv951574 CNV duplication 24416366
nsv951575 CNV deletion 24416366

Relevant External Links for FAM35BP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM35BP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM35BP Gene

Disorders for FAM35BP Gene

Relevant External Links for FAM35BP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM35BP

No disorders were found for FAM35BP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM35BP Gene

Publications for FAM35BP Gene

  1. Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence. (PMID: 7566098) Adams M.D. … White O. (Nature 1995) 3 64

Products for FAM35BP Gene

Sources for FAM35BP Gene

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