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Aliases for FAM27E4 Gene

Subcategory (RNA class) for FAM27E4 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM27E4 Gene

  • Family With Sequence Similarity 27 Member E4 2 3 5
  • Family With Sequence Similarity 27, Member E4, Pseudogene 2 3
  • Family With Sequence Similarity 27, Member E4 2
  • Uncharacterized Protein LOC107987001 3
  • Protein FAM27E3-Like 3
  • FAM27E4P 3

External Ids for FAM27E4 Gene

Previous HGNC Symbols for FAM27E4 Gene

  • FAM27E4P

Previous GeneCards Identifiers for FAM27E4 Gene

  • GC09P045002
  • GC09P045005
  • GC09P045014

Summaries for FAM27E4 Gene

GeneCards Summary for FAM27E4 Gene

FAM27E4 (Family With Sequence Similarity 27 Member E4) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FAM27E4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM27E4 Gene

Genomics for FAM27E4 Gene

Regulatory Elements for FAM27E4 Gene

Enhancers for FAM27E4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H062798 1.1 ENCODE 10 +939.1 939125 4 ARNT ARID4B SIN3A YBX1 DMAP1 ZNF143 SP3 MCM3 MXD4 REST FAM27E4 LINC01410 FKBP4P7
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAM27E4 on UCSC Golden Path with GeneCards custom track

Promoters for FAM27E4 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000235249 805 401

Genomic Location for FAM27E4 Gene

Chromosome:
9
Start:
61,861,995 bp from pter
End:
61,862,336 bp from pter
Size:
342 bases
Orientation:
Plus strand

Genomic View for FAM27E4 Gene

Genes around FAM27E4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM27E4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM27E4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM27E4 Gene

Proteins for FAM27E4 Gene

Post-translational modifications for FAM27E4 Gene

No Post-translational modifications

Other Protein References for FAM27E4 Gene

No data available for DME Specific Peptides for FAM27E4 Gene

Domains & Families for FAM27E4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM27E4 Gene

Function for FAM27E4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM27E4 Gene

Localization for FAM27E4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM27E4 Gene

Pathways & Interactions for FAM27E4 Gene

SuperPathways for FAM27E4 Gene

No Data Available

Interacting Proteins for FAM27E4 Gene

Gene Ontology (GO) - Biological Process for FAM27E4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM27E4 Gene

Drugs & Compounds for FAM27E4 Gene

No Compound Related Data Available

Transcripts for FAM27E4 Gene

mRNA/cDNA for FAM27E4 Gene

(3) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM27E4 Gene

No ASD Table

Relevant External Links for FAM27E4 Gene

GeneLoc Exon Structure for
FAM27E4
ECgene alternative splicing isoforms for
FAM27E4

Expression for FAM27E4 Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM27E4 Gene:

FAM27E4
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM27E4 Gene

Orthologs for FAM27E4 Gene

Evolution for FAM27E4 Gene

ENSEMBL:
Gene Tree for FAM27E4 (if available)
TreeFam:
Gene Tree for FAM27E4 (if available)

No data available for Orthologs for FAM27E4 Gene

Paralogs for FAM27E4 Gene

No data available for Paralogs for FAM27E4 Gene

Variants for FAM27E4 Gene

Sequence variations from dbSNP and Humsavar for FAM27E4 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000188318 -- 61,878,701(+) TGATA(C/G)CTTCC intron-variant
rs1000220854 -- 61,872,892(+) GCCTA(C/T)GCTCA intron-variant
rs1001736956 -- 61,878,819(+) GCTAC(A/C)CCCCC intron-variant
rs1002104422 -- 61,879,015(+) ATTTT(G/T)GGTGA intron-variant
rs1002705772 -- 61,894,029(+) TCTCT(C/T)GACCC intron-variant

Relevant External Links for FAM27E4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM27E4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM27E4 Gene

Disorders for FAM27E4 Gene

No disorders were found for FAM27E4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FAM27E4 Gene

Publications for FAM27E4 Gene

No publications were found for FAM27E4 Gene.

Products for FAM27E4 Gene

Sources for FAM27E4 Gene

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