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Aliases for FAM27E2 Gene

Subcategory (RNA class) for FAM27E2 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for FAM27E2 Gene

  • Family With Sequence Similarity 27 Member E2 2 3 5
  • Family With Sequence Similarity 27, Member E1 2 3
  • Family With Sequence Similarity 27, Member E2 2 3
  • FAM27E1 3

External Ids for FAM27E2 Gene

Previous HGNC Symbols for FAM27E2 Gene

  • FAM27E1

Previous GeneCards Identifiers for FAM27E2 Gene

  • GC09P045623
  • GC09U901197
  • GC00U924109
  • GC09P045734

Summaries for FAM27E2 Gene

GeneCards Summary for FAM27E2 Gene

FAM27E2 (Family With Sequence Similarity 27 Member E2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM27E2 Gene

Genomics for FAM27E2 Gene

Regulatory Elements for FAM27E2 Gene

Enhancers for FAM27E2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around FAM27E2 on UCSC Golden Path with GeneCards custom track

Promoters for FAM27E2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around FAM27E2 on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM27E2 Gene

41,647,674 bp from pter
41,649,440 bp from pter
1,767 bases
Plus strand

Genomic View for FAM27E2 Gene

Genes around FAM27E2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM27E2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM27E2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM27E2 Gene

Proteins for FAM27E2 Gene

Post-translational modifications for FAM27E2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM27E2 Gene

Domains & Families for FAM27E2 Gene

Suggested Antigen Peptide Sequences for FAM27E2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FAM27E2 Gene

Function for FAM27E2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM27E2 Gene

Localization for FAM27E2 Gene

Subcellular locations from

Jensen Localization Image for FAM27E2 Gene COMPARTMENTS Subcellular localization image for FAM27E2 gene
Compartment Confidence
nucleus 3
mitochondrion 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for FAM27E2 Gene

Pathways & Interactions for FAM27E2 Gene

SuperPathways for FAM27E2 Gene

No Data Available

Interacting Proteins for FAM27E2 Gene

Gene Ontology (GO) - Biological Process for FAM27E2 Gene


No data available for Pathways by source and SIGNOR curated interactions for FAM27E2 Gene

Drugs & Compounds for FAM27E2 Gene

No Compound Related Data Available

Transcripts for FAM27E2 Gene

mRNA/cDNA for FAM27E2 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM27E2 Gene

Family with sequence similarity 27, member E2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM27E2 Gene

No ASD Table

Relevant External Links for FAM27E2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FAM27E2 Gene

mRNA expression in normal human tissues for FAM27E2 Gene

mRNA differential expression in normal tissues according to GTEx for FAM27E2 Gene

This gene is overexpressed in Pituitary (x4.9).

SOURCE GeneReport for Unigene cluster for FAM27E2 Gene Hs.651656

genes like me logo Genes that share expression patterns with FAM27E2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM27E2 Gene

Orthologs for FAM27E2 Gene

Evolution for FAM27E2 Gene

Gene Tree for FAM27E2 (if available)
Gene Tree for FAM27E2 (if available)

No data available for Orthologs for FAM27E2 Gene

Paralogs for FAM27E2 Gene

(3) SIMAP similar genes for FAM27E2 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM27E2: view

No data available for Paralogs for FAM27E2 Gene

Variants for FAM27E2 Gene

Sequence variations from dbSNP and Humsavar for FAM27E2 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1756155 -- 41,647,517(+) CCCTG(C/T)CTGAG upstream-variant-2KB
rs113559265 -- 41,646,232(+) GCATC(A/T)GGGGA upstream-variant-2KB
rs199643268 -- 41,646,915(+) GGACA(A/C)CTGCA upstream-variant-2KB
rs200262054 -- 41,646,921(+) CTGCA(A/T)AGAGG upstream-variant-2KB
rs200283915 -- 41,646,247(+) CCCGT(C/T)GACCC upstream-variant-2KB

Variation tolerance for FAM27E2 Gene

Gene Damage Index Score: 4.89; 67.58% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for FAM27E2 Gene

Disorders for FAM27E2 Gene

Relevant External Links for FAM27E2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for FAM27E2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM27E2 Gene

Publications for FAM27E2 Gene

  1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 67
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FAM27E2 Gene

Sources for FAM27E2 Gene