Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FAM27D1 Gene

Subcategory (RNA class) for FAM27D1 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for FAM27D1 Gene

  • Family With Sequence Similarity 27 Member D1 2 3 5
  • Family With Sequence Similarity 27, Member D1 2

External Ids for FAM27D1 Gene

ORGUL Members for FAM27D1 Gene

Previous GeneCards Identifiers for FAM27D1 Gene

  • GC09U900752
  • GC09P046280
  • GC09P046389
  • GC09M045730

Summaries for FAM27D1 Gene

GeneCards Summary for FAM27D1 Gene

FAM27D1 (Family With Sequence Similarity 27 Member D1) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM27D1 Gene

Genomics for FAM27D1 Gene

Regulatory Elements for FAM27D1 Gene

Promoters for FAM27D1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around FAM27D1 on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM27D1 Gene

Chromosome:
9
Start:
41,644,430 bp from pter
End:
41,644,770 bp from pter
Size:
341 bases
Orientation:
Minus strand

Genomic View for FAM27D1 Gene

Genes around FAM27D1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM27D1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM27D1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for FAM27D1 Gene

Proteins for FAM27D1 Gene

  • Protein details for FAM27D1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5T7N8-F27D1_HUMAN
    Recommended name:
    Protein FAM27D1
    Protein Accession:
    Q5T7N8
    Secondary Accessions:
    • Q5VSL6

    Protein attributes for FAM27D1 Gene

    Size:
    215 amino acids
    Molecular mass:
    24905 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAI13103.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for FAM27D1 Gene

Proteomics data for FAM27D1 Gene at MOPED

Post-translational modifications for FAM27D1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM27D1 Gene

Domains & Families for FAM27D1 Gene

Protein Domains for FAM27D1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for FAM27D1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q5T7N8

UniProtKB/Swiss-Prot:

F27D1_HUMAN :
  • Belongs to the FAM27 family.
Family:
  • Belongs to the FAM27 family.
genes like me logo Genes that share domains with FAM27D1: view

No data available for Gene Families for FAM27D1 Gene

Function for FAM27D1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM27D1 Gene

Localization for FAM27D1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM27D1 Gene

Pathways & Interactions for FAM27D1 Gene

SuperPathways for FAM27D1 Gene

No Data Available

Interacting Proteins for FAM27D1 Gene

Gene Ontology (GO) - Biological Process for FAM27D1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM27D1 Gene

Drugs & Compounds for FAM27D1 Gene

No Compound Related Data Available

Transcripts for FAM27D1 Gene

mRNA/cDNA for FAM27D1 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM27D1 Gene

No ASD Table

Relevant External Links for FAM27D1 Gene

GeneLoc Exon Structure for
FAM27D1
ECgene alternative splicing isoforms for
FAM27D1

Expression for FAM27D1 Gene

mRNA expression in normal human tissues for FAM27D1 Gene

mRNA differential expression in normal tissues according to GTEx for FAM27D1 Gene

This gene is overexpressed in Testis (x5.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FAM27D1 Gene



genes like me logo Genes that share expression patterns with FAM27D1: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM27D1 Gene

Orthologs for FAM27D1 Gene

Evolution for FAM27D1 Gene

ENSEMBL:
Gene Tree for FAM27D1 (if available)
TreeFam:
Gene Tree for FAM27D1 (if available)

No data available for Orthologs for FAM27D1 Gene

Paralogs for FAM27D1 Gene

(3) SIMAP similar genes for FAM27D1 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with FAM27D1: view

No data available for Paralogs for FAM27D1 Gene

Variants for FAM27D1 Gene

Relevant External Links for FAM27D1 Gene

HapMap Linkage Disequilibrium report
FAM27D1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM27D1 Gene

Disorders for FAM27D1 Gene

No disorders were found for FAM27D1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for FAM27D1 Gene

Publications for FAM27D1 Gene

  1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 4 67

Products for FAM27D1 Gene

Sources for FAM27D1 Gene

Back to Top

Content