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Aliases for FAM25E Gene

Aliases for FAM25E Gene

  • Family With Sequence Similarity 25, Member E 2 3
  • FAM25D FAM25E 4

External Ids for FAM25E Gene

Summaries for FAM25E Gene

GeneCards Summary for FAM25E Gene

FAM25E (Family With Sequence Similarity 25, Member E) is a Protein Coding gene. An important paralog of this gene is FAM25A.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM25E Gene

Genomics for FAM25E Gene

Genomic Location for FAM25E Gene

Start:
45,815,426 bp from pter
End:
45,817,588 bp from pter
Size:
2,163 bases
Orientation:
Minus strand

Genomic View for FAM25E Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM25E Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM25E Gene

No data available for Regulatory Elements for FAM25E Gene

Proteins for FAM25E Gene

  • Protein details for FAM25E Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MYX2-F25DE_HUMAN
    Recommended name:
    Protein FAM25D/E
    Protein Accession:
    A8MYX2
    Secondary Accessions:

    Protein attributes for FAM25E Gene

    Size:
    175 amino acids
    Molecular mass:
    18345 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM25E Gene

Proteomics data for FAM25E Gene at MOPED

Post-translational modifications for FAM25E Gene

No Post-translational modifications

Other Protein References for FAM25E Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for FAM25E Gene

Domains for FAM25E Gene

Protein Domains for FAM25E Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

F25DE_HUMAN
Family:
  • Belongs to the FAM25 family.:
    • A8MYX2
genes like me logo Genes that share domains with FAM25E: view

No data available for Gene Families for FAM25E Gene

Function for FAM25E Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM25E Gene

Localization for FAM25E Gene

No data available for Gene Ontology (GO) - Cellular Components for FAM25E Gene

Pathways for FAM25E Gene

SuperPathways for FAM25E Gene

No Data Available

Interacting Proteins for FAM25E Gene

Gene Ontology (GO) - Biological Process for FAM25E Gene

None

No data available for Pathways by source for FAM25E Gene

Transcripts for FAM25E Gene

mRNA/cDNA for FAM25E Gene

(2) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM25E Gene

No ASD Table

Relevant External Links for FAM25E Gene

GeneLoc Exon Structure for
FAM25E
ECgene alternative splicing isoforms for
FAM25E

Expression for FAM25E Gene

mRNA expression in normal human tissues for FAM25E Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM25E Gene

genes like me logo Genes that share expressions with FAM25E: view

Orthologs for FAM25E Gene

This gene was present in the common ancestor of mammals.

Orthologs for FAM25E Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 37
  • 70 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 37
  • 58 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Fam25c 37
  • 65 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 53 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 49 (a)
OneToMany
Species with no ortholog for FAM25E:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM25E Gene

ENSEMBL:
Gene Tree for FAM25E (if available)
TreeFam:
Gene Tree for FAM25E (if available)

Paralogs for FAM25E Gene

Paralogs for FAM25E Gene

Selected SIMAP similar genes for FAM25E Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM25E: view

Variants for FAM25E Gene

Relevant External Links for FAM25E Gene

HapMap Linkage Disequilibrium report
FAM25E

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for FAM25E Gene

Disorders for FAM25E Gene

No disorders were found for FAM25E Gene.

No data available for UniProtKB/Swiss-Prot for FAM25E Gene

Publications for FAM25E Gene

  1. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P. … Rogers J. (Nature 2004) 4

Products for FAM25E Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM25E
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM25E
    • Block miRNA regulation of FAM25E using miScript Target Protectors

    Sources for FAM25E Gene

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