Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FAM24B-CUZD1 Gene

Subcategory (RNA class) for FAM24B-CUZD1 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for FAM24B-CUZD1 Gene

  • FAM24B-CUZD1 Readthrough 3

External Ids for FAM24B-CUZD1 Gene

Previous GeneCards Identifiers for FAM24B-CUZD1 Gene

  • GC10U901494
  • GC10M124591

Summaries for FAM24B-CUZD1 Gene

Entrez Gene Summary for FAM24B-CUZD1 Gene

  • This locus represents naturally occurring read-through transcription between the neighboring FAM24B (family with sequence similarity 24, member B) and CUZD1 (CUB and zona pellucida-like domains 1) genes on chromosome 10. The read-transcript is a candidate for nonsense-mediated mRNA decay, and is thus unlikely to produce a protein product. [provided by RefSeq, Feb 2011]

GeneCards Summary for FAM24B-CUZD1 Gene

FAM24B-CUZD1 (FAM24B-CUZD1 Readthrough) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM24B-CUZD1 Gene

Genomics for FAM24B-CUZD1 Gene

Regulatory Elements for FAM24B-CUZD1 Gene


Promoters for FAM24B-CUZD1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000034629 41 1601 HDGF ATF1 CREB3L1 WRNIP1 ARID4B SIN3A GLI4 YY1 GLIS2 ZNF143

Genomic Location for FAM24B-CUZD1 Gene

Chromosome:
10
Start:
122,832,155 bp from pter
End:
122,879,641 bp from pter
Size:
47,487 bases
Orientation:
Minus strand

Genomic View for FAM24B-CUZD1 Gene

Genes around FAM24B-CUZD1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM24B-CUZD1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM24B-CUZD1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM24B-CUZD1 Gene

Proteins for FAM24B-CUZD1 Gene

Post-translational modifications for FAM24B-CUZD1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM24B-CUZD1 Gene

Domains & Families for FAM24B-CUZD1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM24B-CUZD1 Gene

Function for FAM24B-CUZD1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM24B-CUZD1 Gene

Localization for FAM24B-CUZD1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM24B-CUZD1 Gene

Pathways & Interactions for FAM24B-CUZD1 Gene

SuperPathways for FAM24B-CUZD1 Gene

No Data Available

Interacting Proteins for FAM24B-CUZD1 Gene

Gene Ontology (GO) - Biological Process for FAM24B-CUZD1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM24B-CUZD1 Gene

Drugs & Compounds for FAM24B-CUZD1 Gene

No Compound Related Data Available

Transcripts for FAM24B-CUZD1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for FAM24B-CUZD1 Gene

No ASD Table

Relevant External Links for FAM24B-CUZD1 Gene

GeneLoc Exon Structure for
FAM24B-CUZD1

No data available for mRNA/cDNA for FAM24B-CUZD1 Gene

Expression for FAM24B-CUZD1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM24B-CUZD1 Gene

Orthologs for FAM24B-CUZD1 Gene

No data available for Orthologs and Evolution for FAM24B-CUZD1 Gene

Paralogs for FAM24B-CUZD1 Gene

No data available for Paralogs for FAM24B-CUZD1 Gene

Variants for FAM24B-CUZD1 Gene

Sequence variations from dbSNP and Humsavar for FAM24B-CUZD1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000066202 -- 122,848,273(+) TTTGC(A/G)ACTTC intron-variant
rs1000095560 -- 122,848,592(+) ATCAA(C/G)ACACA intron-variant
rs1000127218 -- 122,850,849(+) TATGC(A/G)GCTGG intron-variant
rs1000154764 -- 122,870,367(+) GAGGA(A/G)CTGGT intron-variant
rs1000207777 -- 122,879,948(+) CCTCA(C/T)CCGGG nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM24B-CUZD1 Gene

Variant ID Type Subtype PubMed ID
esv3624789 CNV gain 21293372
esv7958 CNV gain 19470904
nsv1054197 CNV loss 25217958
nsv1159779 CNV deletion 26073780
nsv832010 CNV gain 17160897
nsv975804 CNV duplication 23825009

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for FAM24B-CUZD1 Gene

Disorders for FAM24B-CUZD1 Gene

Relevant External Links for FAM24B-CUZD1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM24B-CUZD1

No disorders were found for FAM24B-CUZD1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM24B-CUZD1 Gene

Publications for FAM24B-CUZD1 Gene

  1. Expression of conjoined genes: another mechanism for gene regulation in eukaryotes. (PMID: 20967262) Prakash T. … Taylor T.D. (PLoS ONE 2010) 3 64
  2. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 3 64

Products for FAM24B-CUZD1 Gene

Sources for FAM24B-CUZD1 Gene

Content
Loading form....