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Aliases for FAM24B Gene

Aliases for FAM24B Gene

  • Family With Sequence Similarity 24, Member B 2 3

External Ids for FAM24B Gene

Summaries for FAM24B Gene

GeneCards Summary for FAM24B Gene

FAM24B (Family With Sequence Similarity 24, Member B) is a Protein Coding gene. An important paralog of this gene is FAM24A.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM24B Gene

Genomics for FAM24B Gene

Genomic Location for FAM24B Gene

Start:
122,849,078 bp from pter
End:
122,879,641 bp from pter
Size:
30,564 bases
Orientation:
Minus strand

Genomic View for FAM24B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM24B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM24B Gene

Regulatory Elements for FAM24B Gene

Proteins for FAM24B Gene

  • Protein details for FAM24B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N5W8-FA24B_HUMAN
    Recommended name:
    Protein FAM24B
    Protein Accession:
    Q8N5W8
    Secondary Accessions:
    • Q5JPG1

    Protein attributes for FAM24B Gene

    Size:
    94 amino acids
    Molecular mass:
    10147 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM24B Gene

Proteomics data for FAM24B Gene at MOPED

Post-translational modifications for FAM24B Gene

No Post-translational modifications

Other Protein References for FAM24B Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM24B Gene

Domains for FAM24B Gene

Protein Domains for FAM24B Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

FA24B_HUMAN
Family:
  • Belongs to the FAM24 family.:
    • Q8N5W8
genes like me logo Genes that share domains with FAM24B: view

No data available for Gene Families for FAM24B Gene

Function for FAM24B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM24B Gene

Localization for FAM24B Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM24B Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM24B Gene COMPARTMENTS Subcellular localization image for FAM24B gene
Compartment Confidence
extracellular 3
plasma membrane 2

Gene Ontology (GO) - Cellular Components for FAM24B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with FAM24B: view

Pathways for FAM24B Gene

SuperPathways for FAM24B Gene

No Data Available

Interacting Proteins for FAM24B Gene

Gene Ontology (GO) - Biological Process for FAM24B Gene

None

No data available for Pathways by source for FAM24B Gene

Transcripts for FAM24B Gene

mRNA/cDNA for FAM24B Gene

Unigene Clusters for FAM24B Gene

Family with sequence similarity 24, member B:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM24B Gene

No ASD Table

Relevant External Links for FAM24B Gene

GeneLoc Exon Structure for
FAM24B
ECgene alternative splicing isoforms for
FAM24B

Expression for FAM24B Gene

mRNA expression in normal human tissues for FAM24B Gene

mRNA expression in normal human tissues for FAM24B Gene

SOURCE GeneReport for Unigene cluster for FAM24B Gene Hs.114648

genes like me logo Genes that share expressions with FAM24B: view

Orthologs for FAM24B Gene

This gene was present in the common ancestor of mammals.

Orthologs for FAM24B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FAM24B 37
  • 95 (a)
OneToOne
LOC100610674 36
  • 97.75 (n)
  • 95.95 (a)
dog
(Canis familiaris)
Mammalia -- 37
  • 36 (a)
OneToMany
mouse
(Mus musculus)
Mammalia 1700007K09Rik 37
  • 37 (a)
ManyToMany
Fam24a 37
  • 41 (a)
ManyToMany
Species with no ortholog for FAM24B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM24B Gene

ENSEMBL:
Gene Tree for FAM24B (if available)
TreeFam:
Gene Tree for FAM24B (if available)

Paralogs for FAM24B Gene

Paralogs for FAM24B Gene

Selected SIMAP similar genes for FAM24B Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM24B: view

Variants for FAM24B Gene

Sequence variations from dbSNP and Humsavar for FAM24B Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
VAR_038485 -

Structural Variations from Database of Genomic Variants (DGV) for FAM24B Gene

Variant ID Type Subtype PubMed ID
nsv832010 CNV Gain 17160897
esv7958 CNV Gain 19470904

Relevant External Links for FAM24B Gene

HapMap Linkage Disequilibrium report
FAM24B

Disorders for FAM24B Gene

Relevant External Links for FAM24B

Genetic Association Database (GAD)
FAM24B
Human Genome Epidemiology (HuGE) Navigator
FAM24B
genes like me logo Genes that share disorders with FAM24B: view

No data available for UniProtKB/Swiss-Prot for FAM24B Gene

Publications for FAM24B Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 49
  4. The full-ORF clone resource of the German cDNA consortium. (PMID: 17974005) Bechtel S. … Schupp I. (BMC Genomics 2007) 4
  5. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 3

Products for FAM24B Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM24B
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM24B
    • Block miRNA regulation of FAM24B using miScript Target Protectors

    Sources for FAM24B Gene

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