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Aliases for FAM231D Gene

Aliases for FAM231D Gene

  • Family With Sequence Similarity 231 Member D 2 3 5
  • Family With Sequence Similarity 231, Member D 2

External Ids for FAM231D Gene

Previous GeneCards Identifiers for FAM231D Gene

  • GC01P149676

Summaries for FAM231D Gene

GeneCards Summary for FAM231D Gene

FAM231D (Family With Sequence Similarity 231 Member D) is a Protein Coding gene. An important paralog of this gene is FAM231C.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM231D Gene

Genomics for FAM231D Gene

Regulatory Elements for FAM231D Gene

Enhancers for FAM231D Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F149700 0.2 Ensembl 0.8 -0.5 -525 0.2 FAM231D RNU1-68P
GH01F149701 0.4 Ensembl 0.8 -0.9 -925 0.2 ZBTB33 ENSG00000275557 FAM231D RNU1-68P
GH01F149707 0.9 Ensembl 0.4 +6.6 6620 1.9 ATF1 ARNT ZNF2 GTF3C2 FOS REST TSHZ1 KAT8 ZNF610 GLIS1 GOLPH3L PRPF3 SF3B4 APH1A ENSG00000253047 HIST2H2AB TRG-CCC6-1 FAM231D
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FAM231D on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM231D Gene

Chromosome:
1
Start:
149,701,425 bp from pter
End:
149,705,721 bp from pter
Size:
4,297 bases
Orientation:
Plus strand

Genomic View for FAM231D Gene

Genes around FAM231D on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM231D Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM231D Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM231D Gene

Proteins for FAM231D Gene

  • Protein details for FAM231D Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZW35-F231D_HUMAN
    Recommended name:
    Protein FAM231D
    Protein Accession:
    Q6ZW35
    Secondary Accessions:
    • I3L0A6

    Protein attributes for FAM231D Gene

    Size:
    169 amino acids
    Molecular mass:
    18328 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM231D Gene

Post-translational modifications for FAM231D Gene

No Post-translational modifications

Other Protein References for FAM231D Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for FAM231D Gene

Domains & Families for FAM231D Gene

Protein Domains for FAM231D Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q6ZW35

UniProtKB/Swiss-Prot:

F231D_HUMAN :
  • Belongs to the FAM231 family.
Family:
  • Belongs to the FAM231 family.
genes like me logo Genes that share domains with FAM231D: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for FAM231D Gene

Function for FAM231D Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM231D Gene

Localization for FAM231D Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM231D Gene

Pathways & Interactions for FAM231D Gene

SuperPathways for FAM231D Gene

No Data Available

Interacting Proteins for FAM231D Gene

Gene Ontology (GO) - Biological Process for FAM231D Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM231D Gene

Transcripts for FAM231D Gene

mRNA/cDNA for FAM231D Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM231D Gene

No ASD Table

Relevant External Links for FAM231D Gene

GeneLoc Exon Structure for
FAM231D
ECgene alternative splicing isoforms for
FAM231D

Expression for FAM231D Gene

mRNA differential expression in normal tissues according to GTEx for FAM231D Gene

This gene is overexpressed in Whole Blood (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of FAM231D Gene:

FAM231D

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FAM231D Gene

Orthologs for FAM231D Gene

Evolution for FAM231D Gene

ENSEMBL:
Gene Tree for FAM231D (if available)
TreeFam:
Gene Tree for FAM231D (if available)

No data available for Orthologs for FAM231D Gene

Paralogs for FAM231D Gene

Paralogs for FAM231D Gene

(3) SIMAP similar genes for FAM231D Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM231D: view

Variants for FAM231D Gene

Sequence variations from dbSNP and Humsavar for FAM231D Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1054265 -- 149,702,154(-) AACAC(C/T)TTGCA nc-transcript-variant
rs112147491 -- 149,703,211(+) ATAAC(A/T)ATGTA intron-variant
rs112287276 -- 149,705,269(+) AAGCC(A/G)TAACT nc-transcript-variant
rs112304407 -- 149,703,205(+) GCTTC(C/T)ATAAC intron-variant
rs112838381 -- 149,703,318(+) ATGAG(A/G)GACTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM231D Gene

Variant ID Type Subtype PubMed ID
dgv196n106 CNV duplication 24896259
dgv21n111 CNV deletion 26073780
dgv22n111 CNV deletion 26073780
dgv360n100 CNV loss 25217958
dgv376n100 CNV loss 25217958
dgv377n100 CNV gain+loss 25217958
dgv378n100 CNV gain 25217958
dgv379n100 CNV loss 25217958
dgv380n100 CNV gain+loss 25217958
dgv381n100 CNV gain 25217958
dgv383n100 CNV loss 25217958
dgv392n100 CNV gain 25217958
dgv396n100 CNV loss 25217958
dgv397n100 CNV loss 25217958
dgv400n100 CNV gain 25217958
dgv404n100 CNV gain 25217958
dgv408n100 CNV gain 25217958
dgv409n100 CNV gain+loss 25217958
dgv413n100 CNV loss 25217958
dgv52e214 CNV gain 21293372
dgv536n54 CNV gain 21841781
dgv543n54 CNV gain+loss 21841781
dgv545n54 CNV loss 21841781
dgv73n67 CNV gain 20364138
esv21838 CNV gain+loss 19812545
esv2421626 CNV deletion 20811451
esv3584603 CNV loss 24956385
esv3584604 CNV loss 24956385
esv3584608 CNV loss 24956385
esv3894156 CNV loss 25118596
esv3894189 CNV gain+loss 25118596
nsv1005442 CNV loss 25217958
nsv1012720 CNV gain 25217958
nsv1014796 CNV loss 25217958
nsv1075800 CNV duplication 25765185
nsv1139506 CNV duplication 24896259
nsv1148661 CNV duplication 26484159
nsv1161558 CNV duplication 26073780
nsv824564 CNV gain 20364138
nsv831481 CNV gain 17160897
nsv831492 CNV gain 17160897
nsv831503 CNV gain 17160897
nsv831514 CNV gain 17160897
nsv946357 CNV duplication 23825009
nsv946373 CNV duplication 23825009
nsv952733 CNV duplication 24416366
nsv998643 CNV gain 25217958

Variation tolerance for FAM231D Gene

Gene Damage Index Score: 1.22; 24.51% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FAM231D Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM231D

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM231D Gene

Disorders for FAM231D Gene

Relevant External Links for FAM231D

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM231D

No disorders were found for FAM231D Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM231D Gene

Publications for FAM231D Gene

  1. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 4 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for FAM231D Gene

Sources for FAM231D Gene

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