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Aliases for FAM231BP Gene

Aliases for FAM231BP Gene

  • Family With Sequence Similarity 231 Member B, Pseudogene 2 3
  • Family With Sequence Similarity 231 Member B 2 3 5
  • FAM231B 3 4 5
  • Family With Sequence Similarity 231, Member B 2
  • UPF0627 Protein ENSP00000364708 3
  • Protein FAM231B 3

External Ids for FAM231BP Gene

Previous HGNC Symbols for FAM231BP Gene

  • FAM231B

Summaries for FAM231BP Gene

GeneCards Summary for FAM231BP Gene

FAM231BP (Family With Sequence Similarity 231 Member B, Pseudogene) is a Pseudogene. An important paralog of this gene is FAM231D.

Additional gene information for FAM231BP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM231BP Gene

Genomics for FAM231BP Gene

GeneHancer (GH) Regulatory Elements for FAM231BP Gene

Promoters and enhancers for FAM231BP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I016540 Enhancer 1 Ensembl ENCODE 550.8 +1.9 1898 1 HDAC1 PKNOX1 ATF1 FOXA2 RB1 ARNT TCF12 ATF7 REST SMARCA4 FAM231BP ARHGEF19 LINC01772 MST1P2 TRNAG1 GC01M016525
GH01I016544 Enhancer 1.3 Ensembl ENCODE 0.4 +6.6 6590 2 HDGF CLOCK MLX ARNT ARID4B SIN3A FEZF1 ZNF2 ZNF213 E2F8 TRNAG1 CROCC SPEN LINC01772 CROCCP3 FLJ37453 TRE-TTC3-1 ENSG00000237301 NBPF1 ENSG00000261135
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FAM231BP on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM231BP Gene

Genomic Locations for FAM231BP Gene
chr1:16,538,724-16,540,035
(GRCh38/hg38)
Size:
1,312 bases
Orientation:
Plus strand
chr1:16,865,561-16,866,070
(GRCh37/hg19)

Genomic View for FAM231BP Gene

Genes around FAM231BP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM231BP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM231BP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM231BP Gene

Proteins for FAM231BP Gene

  • Protein details for FAM231BP Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NCW3-F231B_HUMAN
    Recommended name:
    Protein FAM231B
    Protein Accession:
    A6NCW3

    Protein attributes for FAM231BP Gene

    Size:
    169 amino acids
    Molecular mass:
    18250 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM231BP Gene

Post-translational modifications for FAM231BP Gene

No Post-translational modifications

Other Protein References for FAM231BP Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM231BP Gene

Domains & Families for FAM231BP Gene

Gene Families for FAM231BP Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for FAM231BP Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

A6NCW3

UniProtKB/Swiss-Prot:

F231B_HUMAN :
  • Belongs to the FAM231 family.
Family:
  • Belongs to the FAM231 family.
genes like me logo Genes that share domains with FAM231BP: view

No data available for Suggested Antigen Peptide Sequences for FAM231BP Gene

Function for FAM231BP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM231BP Gene

Localization for FAM231BP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM231BP Gene

Pathways & Interactions for FAM231BP Gene

SuperPathways for FAM231BP Gene

No Data Available

Interacting Proteins for FAM231BP Gene

Gene Ontology (GO) - Biological Process for FAM231BP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM231BP Gene

Drugs & Compounds for FAM231BP Gene

No Compound Related Data Available

Transcripts for FAM231BP Gene

mRNA/cDNA for FAM231BP Gene

(2) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM231BP Gene

No ASD Table

Relevant External Links for FAM231BP Gene

GeneLoc Exon Structure for
FAM231BP
ECgene alternative splicing isoforms for
FAM231BP

Expression for FAM231BP Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM231BP Gene:

FAM231BP
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM231BP Gene

Orthologs for FAM231BP Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for FAM231BP Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 34
  • 99 (a)
OneToMany
LOC745889 33
  • 98.62 (n)
Species where no ortholog for FAM231BP was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM231BP Gene

ENSEMBL:
Gene Tree for FAM231BP (if available)
TreeFam:
Gene Tree for FAM231BP (if available)

Paralogs for FAM231BP Gene

Paralogs for FAM231BP Gene

Pseudogenes.org Pseudogenes for FAM231BP Gene

genes like me logo Genes that share paralogs with FAM231BP: view

Variants for FAM231BP Gene

Sequence variations from dbSNP and Humsavar for FAM231BP Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000973696 -- 16,537,527(+) C/A 5_prime_UTR_variant, genic_upstream_transcript_variant, upstream_transcript_variant
rs1001003137 -- 16,537,203(+) C/G 5_prime_UTR_variant, genic_upstream_transcript_variant, upstream_transcript_variant
rs1002336511 -- 16,538,459(+) G/A/C 5_prime_UTR_variant, genic_upstream_transcript_variant, upstream_transcript_variant
rs1002452386 -- 16,538,215(+) G/T 5_prime_UTR_variant, genic_upstream_transcript_variant, upstream_transcript_variant
rs1002783475 -- 16,539,556(+) C/T coding_sequence_variant, missense_variant

Variation tolerance for FAM231BP Gene

Gene Damage Index Score: 1.21; 24.40% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for FAM231BP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM231BP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM231BP Gene

Disorders for FAM231BP Gene

Additional Disease Information for FAM231BP

No disorders were found for FAM231BP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM231BP Gene

Publications for FAM231BP Gene

  1. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory SG … Prigmore E (Nature 2006) 3 4 58

Products for FAM231BP Gene

Sources for FAM231BP Gene

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