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Aliases for FAM230B Gene

Subcategory (RNA class) for FAM230B Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for FAM230B Gene

  • Family With Sequence Similarity 230, Member B (Non-Protein Coding) 2 3
  • Family With Sequence Similarity 230, Member B 2
  • KB-1183D5.13 3

External Ids for FAM230B Gene

ORGUL Members for FAM230B Gene

Previous GeneCards Identifiers for FAM230B Gene

  • GC22P021527

Summaries for FAM230B Gene

GeneCards Summary for FAM230B Gene

FAM230B (Family With Sequence Similarity 230, Member B (Non-Protein Coding)) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM230B Gene

Genomics for FAM230B Gene

Genomic Location for FAM230B Gene

Start:
21,166,903 bp from pter
End:
21,302,681 bp from pter
Size:
135,779 bases
Orientation:
Plus strand

Genomic View for FAM230B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM230B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM230B Gene

No data available for Regulatory Elements for FAM230B Gene

Proteins for FAM230B Gene

Post-translational modifications for FAM230B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM230B Gene

Domains for FAM230B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM230B Gene

Function for FAM230B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM230B Gene

Localization for FAM230B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM230B Gene

Pathways for FAM230B Gene

SuperPathways for FAM230B Gene

No Data Available

Interacting Proteins for FAM230B Gene

Gene Ontology (GO) - Biological Process for FAM230B Gene

None

No data available for Pathways by source for FAM230B Gene

Transcripts for FAM230B Gene

mRNA/cDNA for FAM230B Gene

(1) REFSEQ mRNAs :
(10) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FAM230B

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM230B Gene

No ASD Table

Relevant External Links for FAM230B Gene

GeneLoc Exon Structure for
FAM230B
ECgene alternative splicing isoforms for
FAM230B

Expression for FAM230B Gene

mRNA expression in normal human tissues for FAM230B Gene

mRNA differential expression in normal tissues according to GTEx for FAM230B Gene

This gene is overexpressed in Testis (49.0).
genes like me logo Genes that share expressions with FAM230B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for FAM230B Gene

Orthologs for FAM230B Gene

Evolution for FAM230B Gene

ENSEMBL:
Gene Tree for FAM230B (if available)
TreeFam:
Gene Tree for FAM230B (if available)

No data available for Orthologs for FAM230B Gene

Paralogs for FAM230B Gene

No data available for Paralogs for FAM230B Gene

Variants for FAM230B Gene

Sequence variations from dbSNP and Humsavar for FAM230B Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs470219 -- 21,172,932(-) CTACA(G/T)GCCAG intron-variant
rs479894 -- 21,168,747(-) GTTTT(A/C)TTTCA intron-variant
rs495996 -- 21,185,613(+) TTTCT(C/G)TTCAA intron-variant
rs510868 -- 21,184,034(+) GCCAA(A/G)GAGGA nc-transcript-variant
rs512631 -- 21,184,246(+) CATCG(A/C)CAAGG nc-transcript-variant

Relevant External Links for FAM230B Gene

HapMap Linkage Disequilibrium report
FAM230B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM230B Gene

Disorders for FAM230B Gene

No disorders were found for FAM230B Gene.

No data available for UniProtKB/Swiss-Prot for FAM230B Gene

Publications for FAM230B Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3

Products for FAM230B Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM230B
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM230B
    • Block miRNA regulation of FAM230B using miScript Target Protectors

    Sources for FAM230B Gene

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