Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FAM230A Gene

Subcategory (RNA class) for FAM230A Gene

ncRNA

Quality Score for this RNA gene is

3

Aliases for FAM230A Gene

  • Family With Sequence Similarity 230 Member A 2 3 5
  • Family With Sequence Similarity 230, Member A 2
  • DGCR15 3

External Ids for FAM230A Gene

Previous GeneCards Identifiers for FAM230A Gene

  • GC22P020694
  • GC22P018486

Summaries for FAM230A Gene

GeneCards Summary for FAM230A Gene

FAM230A (Family With Sequence Similarity 230 Member A) is an RNA Gene, and is affiliated with the ncRNA class. An important paralog of this gene is LOC642643.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM230A Gene

Genomics for FAM230A Gene

Regulatory Elements for FAM230A Gene

Enhancers for FAM230A Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around FAM230A on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM230A Gene

Chromosome:
22
Start:
18,487,126 bp from pter
End:
18,500,595 bp from pter
Size:
13,470 bases
Orientation:
Plus strand

Genomic View for FAM230A Gene

Genes around FAM230A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM230A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM230A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM230A Gene

Proteins for FAM230A Gene

  • Protein details for FAM230A Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    K4HVA1
    Recommended name:
    FAM230A
    Protein Accession:
    K4HVA1

    Protein attributes for FAM230A Gene

    Size:
    316 amino acids
    Molecular mass:
    33909 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM230A Gene

Proteomics data for FAM230A Gene at MOPED

Post-translational modifications for FAM230A Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM230A Gene

Domains & Families for FAM230A Gene

Protein Domains for FAM230A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM230A: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM230A Gene

Function for FAM230A Gene

Phenotypes for FAM230A Gene

GenomeRNAi human phenotypes for FAM230A:
genes like me logo Genes that share phenotypes with FAM230A: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM230A Gene

Localization for FAM230A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM230A Gene

Pathways & Interactions for FAM230A Gene

SuperPathways for FAM230A Gene

No Data Available

Interacting Proteins for FAM230A Gene

Gene Ontology (GO) - Biological Process for FAM230A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM230A Gene

Drugs & Compounds for FAM230A Gene

No Compound Related Data Available

Expression for FAM230A Gene

mRNA expression in normal human tissues for FAM230A Gene

mRNA differential expression in normal tissues according to GTEx for FAM230A Gene

This gene is overexpressed in Testis (x52.0).
genes like me logo Genes that share expression patterns with FAM230A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM230A Gene

Orthologs for FAM230A Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM230A Gene

Organism Taxonomy Gene Similarity Type Details
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC101732313 35
Species with no ortholog for FAM230A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM230A Gene

ENSEMBL:
Gene Tree for FAM230A (if available)
TreeFam:
Gene Tree for FAM230A (if available)

Paralogs for FAM230A Gene

Paralogs for FAM230A Gene

genes like me logo Genes that share paralogs with FAM230A: view

Variants for FAM230A Gene

Sequence variations from dbSNP and Humsavar for FAM230A Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs9605109 -- 18,495,441(+) GAGGC(A/G)GGATC intron-variant, nc-transcript-variant
rs9605110 -- 18,495,735(+) TGTAG(C/G)CCCAA intron-variant
rs9605544 -- 18,497,752(-) GCACA(C/T)TGATT intron-variant, nc-transcript-variant
rs9605686 -- 18,496,965(+) tgatg(C/T)atcac intron-variant
rs9606357 -- 18,493,861(+) CTATA(C/T)GACAT nc-transcript-variant, reference, synonymous-codon

Variation tolerance for FAM230A Gene

Gene Damage Index Score: 38.14; 99.98% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FAM230A Gene

HapMap Linkage Disequilibrium report
FAM230A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM230A Gene

Disorders for FAM230A Gene

Relevant External Links for FAM230A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM230A

No disorders were found for FAM230A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM230A Gene

Publications for FAM230A Gene

No publications were found for FAM230A Gene.

Products for FAM230A Gene

Sources for FAM230A Gene

Content