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Aliases for FAM230A Gene

Aliases for FAM230A Gene

  • Family With Sequence Similarity 230, Member A 2 3
  • DGCR15 3

External Ids for FAM230A Gene

Previous GeneCards Identifiers for FAM230A Gene

  • GC22P020694

Summaries for FAM230A Gene

GeneCards Summary for FAM230A Gene

FAM230A (Family With Sequence Similarity 230, Member A) is a Protein Coding gene. An important paralog of this gene is LOC642643.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM230A Gene

Genomics for FAM230A Gene

Genomic Location for FAM230A Gene

Start:
18,486,901 bp from pter
End:
18,493,066 bp from pter
Size:
6,166 bases
Orientation:
Plus strand

Genomic View for FAM230A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM230A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM230A Gene

No data available for Regulatory Elements for FAM230A Gene

Proteins for FAM230A Gene

  • Protein details for FAM230A Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    K4HVA1
    Recommended name:
    FAM230A
    Protein Accession:
    K4HVA1
    Secondary Accessions:

    Protein attributes for FAM230A Gene

    Size:
    316 amino acids
    Molecular mass:
    33909 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM230A Gene

Proteomics data for FAM230A Gene at MOPED

Post-translational modifications for FAM230A Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM230A Gene

Domains for FAM230A Gene

Protein Domains for FAM230A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM230A: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM230A Gene

Function for FAM230A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM230A Gene

Localization for FAM230A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM230A Gene

Pathways for FAM230A Gene

SuperPathways for FAM230A Gene

No Data Available

Interacting Proteins for FAM230A Gene

Gene Ontology (GO) - Biological Process for FAM230A Gene

None

No data available for Pathways by source for FAM230A Gene

Transcripts for FAM230A Gene

mRNA/cDNA for FAM230A Gene

(5) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM230A Gene

No ASD Table

Relevant External Links for FAM230A Gene

GeneLoc Exon Structure for
FAM230A
ECgene alternative splicing isoforms for
FAM230A

Expression for FAM230A Gene

mRNA expression in normal human tissues for FAM230A Gene

mRNA differential expression in normal tissues according to GTEx for FAM230A Gene

This gene is overexpressed in Testis (52.0).
genes like me logo Genes that share expressions with FAM230A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for FAM230A Gene

Orthologs for FAM230A Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM230A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 41 (a)
ManyToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC101732313 35
Species with no ortholog for FAM230A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM230A Gene

ENSEMBL:
Gene Tree for FAM230A (if available)
TreeFam:
Gene Tree for FAM230A (if available)

Paralogs for FAM230A Gene

Paralogs for FAM230A Gene

genes like me logo Genes that share paralogs with FAM230A: view

Variants for FAM230A Gene

Sequence variations from dbSNP and Humsavar for FAM230A Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs606566 -- 18,485,426(+) AACCA(C/T)TTGAA upstream-variant-2KB
rs1269922 -- 18,485,639(+) GTTCT(C/G)TCTTG upstream-variant-2KB
rs1269923 -- 18,489,428(+) GTAAT(A/C)CAAAA intron-variant
rs3962732 -- 18,490,218(+) CTGCT(A/C)AGGTG intron-variant
rs5746571 -- 18,486,542(+) TATCA(A/G)TAACA upstream-variant-2KB

Relevant External Links for FAM230A Gene

HapMap Linkage Disequilibrium report
FAM230A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM230A Gene

Disorders for FAM230A Gene

No disorders were found for FAM230A Gene.

No data available for UniProtKB/Swiss-Prot for FAM230A Gene

Publications for FAM230A Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 3

Products for FAM230A Gene

Sources for FAM230A Gene

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