Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FAM229B Gene

Aliases for FAM229B Gene

  • Family With Sequence Similarity 229, Member B 2 3
  • C6orf225 3 4
  • Chromosome 6 Open Reading Frame 225 2
  • UPF0731 Protein C6orf225 3
  • Protein FAM229B 3

External Ids for FAM229B Gene

Previous Symbols for FAM229B Gene

  • C6orf225

Summaries for FAM229B Gene

GeneCards Summary for FAM229B Gene

FAM229B (Family With Sequence Similarity 229, Member B) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM229B Gene

Genomics for FAM229B Gene

Genomic Location for FAM229B Gene

Start:
112,087,471 bp from pter
End:
112,102,790 bp from pter
Size:
15,320 bases
Orientation:
Plus strand

Genomic View for FAM229B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM229B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM229B Gene

No data available for Regulatory Elements for FAM229B Gene

Proteins for FAM229B Gene

  • Protein details for FAM229B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q4G0N7-F229B_HUMAN
    Recommended name:
    Protein FAM229B
    Protein Accession:
    Q4G0N7
    Secondary Accessions:
    • B8ZZ33

    Protein attributes for FAM229B Gene

    Size:
    80 amino acids
    Molecular mass:
    8717 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM229B Gene

Proteomics data for FAM229B Gene at MOPED

Post-translational modifications for FAM229B Gene

No Post-translational modifications

Other Protein References for FAM229B Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM229B Gene

Domains for FAM229B Gene

Protein Domains for FAM229B Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

F229B_HUMAN
Family:
  • Belongs to the FAM229 family.:
    • Q4G0N7
genes like me logo Genes that share domains with FAM229B: view

No data available for Gene Families for FAM229B Gene

Function for FAM229B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM229B Gene

Localization for FAM229B Gene

No data available for Gene Ontology (GO) - Cellular Components for FAM229B Gene

Pathways for FAM229B Gene

SuperPathways for FAM229B Gene

No Data Available

Interacting Proteins for FAM229B Gene

Gene Ontology (GO) - Biological Process for FAM229B Gene

None

No data available for Pathways by source for FAM229B Gene

Transcripts for FAM229B Gene

mRNA/cDNA for FAM229B Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM229B Gene

Family with sequence similarity 229, member B:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM229B Gene

No ASD Table

Relevant External Links for FAM229B Gene

GeneLoc Exon Structure for
FAM229B
ECgene alternative splicing isoforms for
FAM229B

Expression for FAM229B Gene

mRNA expression in normal human tissues for FAM229B Gene

mRNA differential expression in normal tissues according to GTEx for FAM229B Gene

This gene is overexpressed in Testis (8.7) and Brain - Spinal cord (cervical c-1) (4.2).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM229B Gene

SOURCE GeneReport for Unigene cluster for FAM229B Gene Hs.591340

genes like me logo Genes that share expressions with FAM229B: view

Orthologs for FAM229B Gene

This gene was present in the common ancestor of mammals.

Orthologs for FAM229B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C6H6orf225 36
  • 97.92 (n)
  • 96.25 (a)
FAM229B 37
  • 96 (a)
OneToOne
cow
(Bos Taurus)
Mammalia FAM229B 36
  • 90.83 (n)
  • 92.5 (a)
FAM229B 37
  • 93 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C12H6orf225 36
  • 93.75 (n)
  • 93.75 (a)
FAM229B 37
  • 94 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fam229b 36
  • 89.58 (n)
  • 90 (a)
Fam229b 16
Fam229b 37
  • 90 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia FAM229B 37
  • 86 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fam229b 36
  • 90.42 (n)
  • 90 (a)
Species with no ortholog for FAM229B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM229B Gene

ENSEMBL:
Gene Tree for FAM229B (if available)
TreeFam:
Gene Tree for FAM229B (if available)

Paralogs for FAM229B Gene

Selected SIMAP similar genes for FAM229B Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM229B: view

No data available for Paralogs for FAM229B Gene

Variants for FAM229B Gene

Sequence variations from dbSNP and Humsavar for FAM229B Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs916429 -- 112,100,602(+) AACTT(C/T)GGTGC intron-variant
rs1014479 -- 112,101,365(+) ATCTG(C/G)GCTCC utr-variant-3-prime
rs1044181 -- 112,100,751(+) AAGCC(A/C)CCTGC reference, synonymous-codon
rs2010314 -- 112,101,461(-) CTTCG(A/C/G/T)GTACA utr-variant-3-prime
rs2010315 -- 112,101,444(-) TAACC(A/G)GACGT utr-variant-3-prime

Relevant External Links for FAM229B Gene

HapMap Linkage Disequilibrium report
FAM229B

No data available for Structural Variations from Database of Genomic Variants (DGV) for FAM229B Gene

Disorders for FAM229B Gene

No disorders were found for FAM229B Gene.

No data available for UniProtKB/Swiss-Prot for FAM229B Gene

Publications for FAM229B Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for FAM229B Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM229B
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM229B
    • Block miRNA regulation of FAM229B using miScript Target Protectors

    Sources for FAM229B Gene

    Back to Top

    Content