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Aliases for FAM225B Gene

Subcategory (RNA class) for FAM225B Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for FAM225B Gene

  • Family With Sequence Similarity 225 Member B (Non-Protein Coding) 2 3 5
  • Long Intergenic Non-Protein Coding RNA 256B 2 3
  • Non-Protein Coding RNA 256B 2 3
  • Family With Sequence Similarity 225, Member B (Non-Protein Coding) 2
  • Chromosome 9 Open Reading Frame 110 2
  • NCRNA00256B 3
  • LINC00256B 3
  • C9orf110 3

External Ids for FAM225B Gene

Previous HGNC Symbols for FAM225B Gene

  • C9orf110
  • NCRNA00256B
  • LINC00256B

Previous GeneCards Identifiers for FAM225B Gene

  • GC09M115877
  • GC09M115881
  • GC09M115882
  • GC09M115899

Summaries for FAM225B Gene

GeneCards Summary for FAM225B Gene

FAM225B (Family With Sequence Similarity 225 Member B (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FAM225B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM225B Gene

Genomics for FAM225B Gene

GeneHancer (GH) Regulatory Elements for FAM225B Gene

Promoters and enhancers for FAM225B Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I113111 Promoter 0.8 Ensembl 559.4 +0.3 276 0.4 CTCF NFIC NFIB ZNF143 REST ZNF444 RAD21 FAM225B FAM225A GC09P114262 GC09P114503 GC09P114639 GC09M113112 PIR34825 PIR36031 PIR37596 GC09M113106
GH09I113113 Promoter 0.8 Ensembl 550.8 -1.5 -1524 0.4 CTCF NFIC NFIB RAD21 FAM225A FAM225B GC09P114184 GC09P114223 GC09P114229 GC09P114248 GC09P114253 GC09P114254 GC09P114256 GC09P114262
GH09I112172 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.3 +936.6 936574 4.6 HDGF PKNOX1 FOXA2 ARID4B ZNF48 POLR2B ZNF766 GLIS2 RUNX3 REST SUSD1 RPL29P20 GC09M112174 FAM225B
GH09I113131 Enhancer 1 FANTOM5 dbSUPER 8.8 -20.1 -20148 0.4 ARID4B SIN3A ZNF644 ZSCAN9 RARA CHAMP1 ZNF766 GATA3 ZNF316 ZNF143 SLC31A2 SLC31A1 FKBP15 CDC26 PRPF4 FAM225B HDHD3 RGS3 SNX30 PIR44474
GH09I113138 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 5.6 -27.9 -27857 1.7 ELF3 FOXA2 MLX ARID4B THRB ZNF48 ZSCAN9 RARA FOS THAP11 FAM225B ALAD ZNF883 SLC31A2 PIR44474
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FAM225B on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM225B Gene

Genomic Locations for FAM225B Gene
8,340 bases
Minus strand

Genomic View for FAM225B Gene

Genes around FAM225B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM225B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM225B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM225B Gene

Proteins for FAM225B Gene

Post-translational modifications for FAM225B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM225B Gene

Domains & Families for FAM225B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM225B Gene

Function for FAM225B Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM225B Gene

Localization for FAM225B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM225B Gene

Pathways & Interactions for FAM225B Gene

SuperPathways for FAM225B Gene

No Data Available

Interacting Proteins for FAM225B Gene

Gene Ontology (GO) - Biological Process for FAM225B Gene


No data available for Pathways by source and SIGNOR curated interactions for FAM225B Gene

Drugs & Compounds for FAM225B Gene

No Compound Related Data Available

Transcripts for FAM225B Gene

mRNA/cDNA for FAM225B Gene

(10) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM225B Gene

Family with sequence similarity 225, member B (non-protein coding):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM225B Gene

No ASD Table

Relevant External Links for FAM225B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FAM225B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM225B Gene

mRNA differential expression in normal tissues according to GTEx for FAM225B Gene

This gene is overexpressed in Testis (x29.9).

NURSA nuclear receptor signaling pathways regulating expression of FAM225B Gene:


SOURCE GeneReport for Unigene cluster for FAM225B Gene:

genes like me logo Genes that share expression patterns with FAM225B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM225B Gene

Orthologs for FAM225B Gene

Evolution for FAM225B Gene

Gene Tree for FAM225B (if available)
Gene Tree for FAM225B (if available)

No data available for Orthologs for FAM225B Gene

Paralogs for FAM225B Gene

No data available for Paralogs for FAM225B Gene

Variants for FAM225B Gene

Sequence variations from dbSNP and Humsavar for FAM225B Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000063017 -- 113,105,111(-) T/C non_coding_transcript_variant
rs1000529952 -- 113,112,830(-) A/G upstream_transcript_variant
rs1001242844 -- 113,104,871(-) A/G non_coding_transcript_variant
rs1001590723 -- 113,104,749(-) T/A non_coding_transcript_variant
rs1003989351 -- 113,111,486(-) G/A/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for FAM225B Gene

Variant ID Type Subtype PubMed ID
dgv1232n67 CNV gain 20364138
dgv12853n54 CNV loss 21841781
dgv2180e212 CNV gain 25503493
dgv279n111 CNV duplication 26073780
dgv7704n100 CNV loss 25217958
dgv943n27 CNV loss 19166990
dgv944n27 CNV loss 19166990
esv1001772 OTHER inversion 20482838
esv2421517 CNV deletion 20811451
esv2759710 CNV gain 17122850
esv2761253 CNV loss 21179565
esv3545336 CNV deletion 23714750
esv3621529 CNV loss 21293372
esv3621530 CNV gain 21293372
esv3621531 CNV loss 21293372
esv3891713 CNV loss 25118596
esv3891715 CNV gain 25118596
esv3891716 CNV loss 25118596
nsv1038932 CNV loss 25217958
nsv1043365 CNV loss 25217958
nsv1047252 CNV gain+loss 25217958
nsv442164 CNV gain+loss 18776908
nsv466495 CNV gain 19166990
nsv471318 CNV gain 18288195
nsv515822 CNV loss 19592680
nsv615209 CNV gain+loss 21841781
nsv7431 OTHER inversion 18451855
nsv831691 CNV loss 17160897
nsv982338 CNV duplication 23825009

Additional Variant Information for FAM225B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM225B Gene

Disorders for FAM225B Gene

Additional Disease Information for FAM225B

No disorders were found for FAM225B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM225B Gene

Publications for FAM225B Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for FAM225B Gene

Sources for FAM225B Gene

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