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Aliases for FAM225B Gene

Subcategory (RNA class) for FAM225B Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM225B Gene

  • Family With Sequence Similarity 225 Member B (Non-Protein Coding) 2 3 5
  • Family With Sequence Similarity 225, Member B (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 256B 2 3
  • Non-Protein Coding RNA 256B 2 3
  • Chromosome 9 Open Reading Frame 110 2
  • NCRNA00256B 3
  • LINC00256B 3
  • C9orf110 3

External Ids for FAM225B Gene

Previous HGNC Symbols for FAM225B Gene

  • C9orf110
  • NCRNA00256B
  • LINC00256B

Previous GeneCards Identifiers for FAM225B Gene

  • GC09M115877
  • GC09M115881
  • GC09M115882
  • GC09M115899

Summaries for FAM225B Gene

GeneCards Summary for FAM225B Gene

FAM225B (Family With Sequence Similarity 225 Member B (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM225B Gene

Genomics for FAM225B Gene

Regulatory Elements for FAM225B Gene

Promoters for FAM225B Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around FAM225B on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM225B Gene

Chromosome:
9
Start:
113,103,338 bp from pter
End:
113,111,677 bp from pter
Size:
8,340 bases
Orientation:
Minus strand

Genomic View for FAM225B Gene

Genes around FAM225B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM225B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM225B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM225B Gene

Proteins for FAM225B Gene

Post-translational modifications for FAM225B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM225B Gene

Domains & Families for FAM225B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM225B Gene

Function for FAM225B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM225B Gene

Localization for FAM225B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM225B Gene

Pathways & Interactions for FAM225B Gene

SuperPathways for FAM225B Gene

No Data Available

Interacting Proteins for FAM225B Gene

Gene Ontology (GO) - Biological Process for FAM225B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM225B Gene

Drugs & Compounds for FAM225B Gene

No Compound Related Data Available

Transcripts for FAM225B Gene

mRNA/cDNA for FAM225B Gene

(10) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM225B Gene

Family with sequence similarity 225, member B (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM225B Gene

No ASD Table

Relevant External Links for FAM225B Gene

GeneLoc Exon Structure for
FAM225B
ECgene alternative splicing isoforms for
FAM225B

Expression for FAM225B Gene

mRNA expression in normal human tissues for FAM225B Gene

mRNA differential expression in normal tissues according to GTEx for FAM225B Gene

This gene is overexpressed in Testis (x29.9).

SOURCE GeneReport for Unigene cluster for FAM225B Gene Hs.99052

genes like me logo Genes that share expression patterns with FAM225B: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM225B Gene

Orthologs for FAM225B Gene

Evolution for FAM225B Gene

ENSEMBL:
Gene Tree for FAM225B (if available)
TreeFam:
Gene Tree for FAM225B (if available)

No data available for Orthologs for FAM225B Gene

Paralogs for FAM225B Gene

No data available for Paralogs for FAM225B Gene

Variants for FAM225B Gene

Sequence variations from dbSNP and Humsavar for FAM225B Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs944301 -- 113,104,738(-) GTAAT(A/G)AACAT nc-transcript-variant
rs944302 -- 113,104,666(-) ATACT(A/G)TGGTT downstream-variant-500B
rs2009977 -- 113,104,996(-) TGCAT(C/T)TTTTC nc-transcript-variant
rs6477985 -- 113,104,424(+) TTACA(C/G)GCGTG downstream-variant-500B
rs4979212 -- 113,106,374(+) CTTTG(C/T)TTCCT nc-transcript-variant

Relevant External Links for FAM225B Gene

HapMap Linkage Disequilibrium report
FAM225B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM225B Gene

Disorders for FAM225B Gene

Relevant External Links for FAM225B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM225B

No disorders were found for FAM225B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM225B Gene

Publications for FAM225B Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FAM225B Gene

Sources for FAM225B Gene

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