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Aliases for FAM225B Gene

Subcategory (RNA class) for FAM225B Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for FAM225B Gene

  • Family With Sequence Similarity 225, Member B (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 256B 2 3
  • Non-Protein Coding RNA 256B 2 3
  • Chromosome 9 Open Reading Frame 110 2
  • NCRNA00256B 3
  • LINC00256B 3
  • C9orf110 3

External Ids for FAM225B Gene

ORGUL Members for FAM225B Gene

Previous Symbols for FAM225B Gene

  • C9orf110
  • NCRNA00256B
  • LINC00256B

Summaries for FAM225B Gene

GeneCards Summary for FAM225B Gene

FAM225B (Family With Sequence Similarity 225, Member B (Non-Protein Coding)) is an RNA Gene, and belongs to the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM225B Gene

Genomics for FAM225B Gene

Genomic Location for FAM225B Gene

Start:
113,103,338 bp from pter
End:
113,111,677 bp from pter
Size:
8,340 bases
Orientation:
Minus strand

Genomic View for FAM225B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM225B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM225B Gene

No data available for Regulatory Elements for FAM225B Gene

Proteins for FAM225B Gene

Post-translational modifications for FAM225B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM225B Gene

Domains for FAM225B Gene

Gene Families for FAM225B Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM225B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM225B Gene

Function for FAM225B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM225B Gene

Localization for FAM225B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM225B Gene

Pathways for FAM225B Gene

SuperPathways for FAM225B Gene

No Data Available

Interacting Proteins for FAM225B Gene

Gene Ontology (GO) - Biological Process for FAM225B Gene

None

No data available for Pathways by source for FAM225B Gene

Transcripts for FAM225B Gene

mRNA/cDNA for FAM225B Gene

(10) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM225B Gene

Family with sequence similarity 225, member B (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM225B Gene

No ASD Table

Relevant External Links for FAM225B Gene

GeneLoc Exon Structure for
FAM225B
ECgene alternative splicing isoforms for
FAM225B

Expression for FAM225B Gene

mRNA expression in normal human tissues for FAM225B Gene

mRNA differential expression in normal tissues according to GTEx for FAM225B Gene

This gene is overexpressed in Testis (29.9).

SOURCE GeneReport for Unigene cluster for FAM225B Gene Hs.99052

genes like me logo Genes that share expressions with FAM225B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for FAM225B Gene

Orthologs for FAM225B Gene

Evolution for FAM225B Gene

ENSEMBL:
Gene Tree for FAM225B (if available)
TreeFam:
Gene Tree for FAM225B (if available)

No data available for Orthologs for FAM225B Gene

Paralogs for FAM225B Gene

No data available for Paralogs for FAM225B Gene

Variants for FAM225B Gene

Sequence variations from dbSNP and Humsavar for FAM225B Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs944301 -- 113,104,738(-) GTAAT(A/G)AACAT nc-transcript-variant
rs944302 -- 113,104,666(-) ATACT(A/G)TGGTT downstream-variant-500B
rs2009977 -- 113,104,996(-) TGCAT(C/T)TTTTC nc-transcript-variant
rs6477985 -- 113,104,424(+) TTACA(C/G)GCGTG downstream-variant-500B
rs10981632 -- 113,105,534(+) CTCAG(C/T)GGTGA nc-transcript-variant

Relevant External Links for FAM225B Gene

HapMap Linkage Disequilibrium report
FAM225B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM225B Gene

Disorders for FAM225B Gene

No disorders were found for FAM225B Gene.

No data available for UniProtKB/Swiss-Prot for FAM225B Gene

Publications for FAM225B Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3
  4. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 3

Products for FAM225B Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM225B
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM225B
    • Block miRNA regulation of FAM225B using miScript Target Protectors

    Sources for FAM225B Gene

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