Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FAM225A Gene

Subcategory (RNA class) for FAM225A Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM225A Gene

  • Family With Sequence Similarity 225 Member A (Non-Protein Coding) 2 3 5
  • Family With Sequence Similarity 225, Member A (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 256A 2 3
  • Non-Protein Coding RNA 256A 2 3
  • Chromosome 9 Open Reading Frame 109 2
  • NCRNA00256A 3
  • LINC00256A 3
  • C9orf109 3

External Ids for FAM225A Gene

Previous HGNC Symbols for FAM225A Gene

  • C9orf109
  • NCRNA00256A
  • LINC00256A

Previous GeneCards Identifiers for FAM225A Gene

  • GC09P116083
  • GC09P116351
  • GC09P116479
  • GC09P116828

Summaries for FAM225A Gene

GeneCards Summary for FAM225A Gene

FAM225A (Family With Sequence Similarity 225 Member A (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM225A Gene

Genomics for FAM225A Gene

Regulatory Elements for FAM225A Gene

Promoters for FAM225A Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around FAM225A on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM225A Gene

Chromosome:
9
Start:
113,112,896 bp from pter
End:
113,119,928 bp from pter
Size:
7,033 bases
Orientation:
Plus strand

Genomic View for FAM225A Gene

Genes around FAM225A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM225A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM225A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM225A Gene

Proteins for FAM225A Gene

Post-translational modifications for FAM225A Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM225A Gene

Domains & Families for FAM225A Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM225A Gene

Function for FAM225A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM225A Gene

Localization for FAM225A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM225A Gene

Pathways & Interactions for FAM225A Gene

SuperPathways for FAM225A Gene

No Data Available

Interacting Proteins for FAM225A Gene

Gene Ontology (GO) - Biological Process for FAM225A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM225A Gene

Drugs & Compounds for FAM225A Gene

No Compound Related Data Available

Transcripts for FAM225A Gene

mRNA/cDNA for FAM225A Gene

Alternative Splicing Database (ASD) splice patterns (SP) for FAM225A Gene

No ASD Table

Relevant External Links for FAM225A Gene

GeneLoc Exon Structure for
FAM225A
ECgene alternative splicing isoforms for
FAM225A

Expression for FAM225A Gene

mRNA expression in normal human tissues for FAM225A Gene

mRNA differential expression in normal tissues according to GTEx for FAM225A Gene

This gene is overexpressed in Testis (x27.8) and Brain - Spinal cord (cervical c-1) (x4.9).
genes like me logo Genes that share expression patterns with FAM225A: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM225A Gene

Orthologs for FAM225A Gene

Evolution for FAM225A Gene

ENSEMBL:
Gene Tree for FAM225A (if available)
TreeFam:
Gene Tree for FAM225A (if available)

No data available for Orthologs for FAM225A Gene

Paralogs for FAM225A Gene

No data available for Paralogs for FAM225A Gene

Variants for FAM225A Gene

Sequence variations from dbSNP and Humsavar for FAM225A Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs12236936 -- 113,119,384(+) AGGAG(G/T)CCTTA nc-transcript-variant
rs41280205 -- 113,119,428(+) TGAGT(A/G)CCTTG nc-transcript-variant
rs41280207 -- 113,119,970(+) GGAGG(C/T)GTTTG downstream-variant-500B
rs80072761 -- 113,119,919(+) TATGA(A/G)CCAGG downstream-variant-500B
rs146237409 -- 113,119,388(+) GGCCT(G/T)AACAT nc-transcript-variant

Relevant External Links for FAM225A Gene

HapMap Linkage Disequilibrium report
FAM225A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM225A Gene

Disorders for FAM225A Gene

Relevant External Links for FAM225A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM225A

No disorders were found for FAM225A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM225A Gene

Publications for FAM225A Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 3 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for FAM225A Gene

Sources for FAM225A Gene

Back to Top

Content