Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FAM223A Gene

Subcategory (RNA class) for FAM223A Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM223A Gene

  • Family With Sequence Similarity 223, Member A (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 204A 2 3
  • LINC00204A 3 4
  • NCRNA00204 3 4
  • CXorf52 3 4
  • SPCX 3 4
  • Chromosome X Open Reading Frame 52 2
  • Non-Protein Coding RNA 204A 2
  • Non-Protein Coding RNA 204 2
  • NCRNA00204A 3

External Ids for FAM223A Gene

Previous HGNC Symbols for FAM223A Gene

  • CXorf52
  • NCRNA00204
  • NCRNA00204A
  • LINC00204A

Previous GeneCards Identifiers for FAM223A Gene

  • GC0XP153802

Summaries for FAM223A Gene

GeneCards Summary for FAM223A Gene

FAM223A (Family With Sequence Similarity 223, Member A (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM223A Gene

Genomics for FAM223A Gene

Genomic Location for FAM223A Gene

Start:
154,632,470 bp from pter
End:
154,633,182 bp from pter
Size:
713 bases
Orientation:
Minus strand

Genomic View for FAM223A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM223A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM223A Gene

No data available for Regulatory Elements for FAM223A Gene

Proteins for FAM223A Gene

  • Protein details for FAM223A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IWN6-F223A_HUMAN
    Recommended name:
    Protein FAM223A
    Protein Accession:
    Q8IWN6
    Secondary Accessions:

    Protein attributes for FAM223A Gene

    Size:
    122 amino acids
    Molecular mass:
    13808 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM223A Gene

Proteomics data for FAM223A Gene at MOPED

Post-translational modifications for FAM223A Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM223A Gene

Domains for FAM223A Gene

Gene Families for FAM223A Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Protein Domains for FAM223A Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q8IWN6

UniProtKB/Swiss-Prot:

F223A_HUMAN :
  • Q8IWN6
Family:
  • Belongs to the FAM223 family.
genes like me logo Genes that share domains with FAM223A: view

No data available for Suggested Antigen Peptide Sequences for FAM223A Gene

Function for FAM223A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM223A Gene

Localization for FAM223A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM223A Gene

Pathways for FAM223A Gene

SuperPathways for FAM223A Gene

No Data Available

Interacting Proteins for FAM223A Gene

Gene Ontology (GO) - Biological Process for FAM223A Gene

None

No data available for Pathways by source for FAM223A Gene

Transcripts for FAM223A Gene

mRNA/cDNA for FAM223A Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM223A Gene

Family with sequence similarity 223, member A (non-protein coding):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM223A Gene

No ASD Table

Relevant External Links for FAM223A Gene

GeneLoc Exon Structure for
FAM223A
ECgene alternative splicing isoforms for
FAM223A

Expression for FAM223A Gene

mRNA expression in normal human tissues for FAM223A Gene

mRNA expression in normal human tissues for FAM223A Gene

SOURCE GeneReport for Unigene cluster for FAM223A Gene Hs.391764

genes like me logo Genes that share expressions with FAM223A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for FAM223A Gene

Orthologs for FAM223A Gene

Evolution for FAM223A Gene

ENSEMBL:
Gene Tree for FAM223A (if available)
TreeFam:
Gene Tree for FAM223A (if available)

No data available for Orthologs for FAM223A Gene

Paralogs for FAM223A Gene

Selected SIMAP similar genes for FAM223A Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with FAM223A: view

No data available for Paralogs for FAM223A Gene

Variants for FAM223A Gene

Sequence variations from dbSNP and Humsavar for FAM223A Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs5945214 -- 154,572,351(-) gaagg(A/G)aggga downstream-variant-500B
rs55864870 -- 154,572,030(+) GAAGA(C/T)CAACA downstream-variant-500B
rs374195621 -- 154,571,613(+) TCTTA(C/T)GGCAG nc-transcript-variant

Relevant External Links for FAM223A Gene

HapMap Linkage Disequilibrium report
FAM223A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM223A Gene

Disorders for FAM223A Gene

No disorders were found for FAM223A Gene.

No data available for UniProtKB/Swiss-Prot for FAM223A Gene

Publications for FAM223A Gene

  1. Toward a confocal subcellular atlas of the human proteome. (PMID: 18029348) Barbe L. … Andersson-Svahn H. (Mol. Cell Proteomics 2008) 3
  2. The DNA sequence of the human X chromosome. (PMID: 15772651) Ross M.T. … Bentley D.R. (Nature 2005) 4

Products for FAM223A Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM223A
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM223A
    • Block miRNA regulation of FAM223A using miScript Target Protectors

    Sources for FAM223A Gene

    Back to Top

    Content