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Aliases for FAM218A Gene

Aliases for FAM218A Gene

  • Family With Sequence Similarity 218, Member A 2 3
  • C4orf39 3 4
  • Chromosome 4 Open Reading Frame 39 2
  • Uncharacterized Protein C4orf39 3
  • Protein FAM218A 3

External Ids for FAM218A Gene

Previous Symbols for FAM218A Gene

  • C4orf39

Summaries for FAM218A Gene

GeneCards Summary for FAM218A Gene

FAM218A (Family With Sequence Similarity 218, Member A) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM218A Gene

Genomics for FAM218A Gene

Genomic Location for FAM218A Gene

Start:
164,956,948 bp from pter
End:
164,959,122 bp from pter
Size:
2,175 bases
Orientation:
Plus strand

Genomic View for FAM218A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM218A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM218A Gene

No data available for Regulatory Elements for FAM218A Gene

Proteins for FAM218A Gene

  • Protein details for FAM218A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96MZ4-F218A_HUMAN
    Recommended name:
    Protein FAM218A
    Protein Accession:
    Q96MZ4
    Secondary Accessions:

    Protein attributes for FAM218A Gene

    Size:
    157 amino acids
    Molecular mass:
    17021 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM218A Gene

Proteomics data for FAM218A Gene at MOPED

Post-translational modifications for FAM218A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FAM218A Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM218A Gene

Domains for FAM218A Gene

Protein Domains for FAM218A Gene

ProtoNet:
genes like me logo Genes that share domains with FAM218A: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FAM218A Gene

Function for FAM218A Gene

Gene Ontology (GO) - Molecular Function for FAM218A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with FAM218A: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM218A Gene

Localization for FAM218A Gene

No data available for Gene Ontology (GO) - Cellular Components for FAM218A Gene

Pathways for FAM218A Gene

SuperPathways for FAM218A Gene

No Data Available

Interacting Proteins for FAM218A Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000427428%0d%0a9606.ENSP00000216455%0d%0a
Selected Interacting proteins: ENSP00000427428 Q96MZ4-F218A_HUMAN for FAM218A Gene via STRING UniProtKB

Gene Ontology (GO) - Biological Process for FAM218A Gene

None

No data available for Pathways by source for FAM218A Gene

Transcripts for FAM218A Gene

mRNA/cDNA for FAM218A Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(20) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM218A Gene

Family with sequence similarity 218, member A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM218A Gene

No ASD Table

Relevant External Links for FAM218A Gene

GeneLoc Exon Structure for
FAM218A
ECgene alternative splicing isoforms for
FAM218A

Expression for FAM218A Gene

mRNA expression in normal human tissues for FAM218A Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for FAM218A Gene

SOURCE GeneReport for Unigene cluster for FAM218A Gene Hs.178648

genes like me logo Genes that share expressions with FAM218A: view

Orthologs for FAM218A Gene

Evolution for FAM218A Gene

ENSEMBL:
Gene Tree for FAM218A (if available)
TreeFam:
Gene Tree for FAM218A (if available)

No data available for Orthologs for FAM218A Gene

Paralogs for FAM218A Gene

Pseudogenes.org Pseudogenes for FAM218A Gene

genes like me logo Genes that share paralogs with FAM218A: view

No data available for Paralogs for FAM218A Gene

Variants for FAM218A Gene

Sequence variations from dbSNP and Humsavar for FAM218A Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
VAR_044025 -

Relevant External Links for FAM218A Gene

HapMap Linkage Disequilibrium report
FAM218A

No data available for Structural Variations from Database of Genomic Variants (DGV) for FAM218A Gene

Disorders for FAM218A Gene

No disorders were found for FAM218A Gene.

No data available for UniProtKB/Swiss-Prot for FAM218A Gene

Publications for FAM218A Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  4. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3
  5. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for FAM218A Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM218A
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM218A
    • Block miRNA regulation of FAM218A using miScript Target Protectors

    Sources for FAM218A Gene

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