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Aliases for FAM218A Gene

Aliases for FAM218A Gene

  • Family With Sequence Similarity 218, Member A 2 3
  • C4orf39 3 4
  • Chromosome 4 Open Reading Frame 39 2
  • Uncharacterized Protein C4orf39 3

External Ids for FAM218A Gene

Previous HGNC Symbols for FAM218A Gene

  • C4orf39

Previous GeneCards Identifiers for FAM218A Gene

  • GC04P165879

Summaries for FAM218A Gene

GeneCards Summary for FAM218A Gene

FAM218A (Family With Sequence Similarity 218, Member A) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM218A Gene

Genomics for FAM218A Gene

Genomic Location for FAM218A Gene

Chromosome:
4
Start:
164,956,948 bp from pter
End:
164,959,122 bp from pter
Size:
2,175 bases
Orientation:
Plus strand

Genomic View for FAM218A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM218A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM218A Gene

No data available for Regulatory Elements for FAM218A Gene

Proteins for FAM218A Gene

  • Protein details for FAM218A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96MZ4-F218A_HUMAN
    Recommended name:
    Protein FAM218A
    Protein Accession:
    Q96MZ4

    Protein attributes for FAM218A Gene

    Size:
    157 amino acids
    Molecular mass:
    17021 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM218A Gene

Proteomics data for FAM218A Gene at MOPED

Post-translational modifications for FAM218A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FAM218A Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM218A Gene

Domains & Families for FAM218A Gene

Protein Domains for FAM218A Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM218A: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM218A Gene

Function for FAM218A Gene

Gene Ontology (GO) - Molecular Function for FAM218A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with FAM218A: view

Phenotypes for FAM218A Gene

GenomeRNAi human phenotypes for FAM218A:
genes like me logo Genes that share phenotypes with FAM218A: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FAM218A

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM218A Gene

Localization for FAM218A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM218A Gene

Pathways & Interactions for FAM218A Gene

SuperPathways for FAM218A Gene

No Data Available

Interacting Proteins for FAM218A Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000427428%0d%0a9606.ENSP00000216455%0d%0a
Selected Interacting proteins: Q96MZ4-F218A_HUMAN ENSP00000427428 for FAM218A Gene via UniProtKB STRING

Gene Ontology (GO) - Biological Process for FAM218A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM218A Gene

Drugs & Compounds for FAM218A Gene

No Compound Related Data Available

Transcripts for FAM218A Gene

mRNA/cDNA for FAM218A Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(20) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM218A Gene

Family with sequence similarity 218, member A:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FAM218A

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM218A Gene

No ASD Table

Relevant External Links for FAM218A Gene

GeneLoc Exon Structure for
FAM218A
ECgene alternative splicing isoforms for
FAM218A

Expression for FAM218A Gene

mRNA expression in normal human tissues for FAM218A Gene

Protein differential expression in normal tissues from HIPED for FAM218A Gene

This gene is overexpressed in Platelet (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for FAM218A Gene



SOURCE GeneReport for Unigene cluster for FAM218A Gene Hs.178648

genes like me logo Genes that share expression patterns with FAM218A: view

Protein tissue co-expression partners for FAM218A Gene

- Elite partner

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM218A Gene

Orthologs for FAM218A Gene

Evolution for FAM218A Gene

ENSEMBL:
Gene Tree for FAM218A (if available)
TreeFam:
Gene Tree for FAM218A (if available)

No data available for Orthologs for FAM218A Gene

Paralogs for FAM218A Gene

Pseudogenes.org Pseudogenes for FAM218A Gene

genes like me logo Genes that share paralogs with FAM218A: view

No data available for Paralogs for FAM218A Gene

Variants for FAM218A Gene

Sequence variations from dbSNP and Humsavar for FAM218A Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
VAR_044025 -

Variation tolerance for FAM218A Gene

Residual Variation Intolerance Score: 74.25% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.84; 67.21% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for FAM218A Gene

HapMap Linkage Disequilibrium report
FAM218A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM218A Gene

Disorders for FAM218A Gene

Relevant External Links for FAM218A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM218A
genes like me logo Genes that share disorders with FAM218A: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM218A Gene

Publications for FAM218A Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 67
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 67
  3. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 67
  4. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 67
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67

Products for FAM218A Gene

Sources for FAM218A Gene

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