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Aliases for FAM215B Gene

Subcategory (RNA class) for FAM215B Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM215B Gene

  • Family With Sequence Similarity 215 Member B (Non-Protein Coding) 2 3 5
  • ARL17A Intronic Transcript 1 (Non-Protein Coding) 2 3
  • Family With Sequence Similarity 215, Member B (Non-Protein Coding) 2
  • ARL17A-IT1 3

External Ids for FAM215B Gene

Previous GeneCards Identifiers for FAM215B Gene

  • GC17M044639
  • GC17M044640
  • GC17M044642

Summaries for FAM215B Gene

GeneCards Summary for FAM215B Gene

FAM215B (Family With Sequence Similarity 215 Member B (Non-Protein Coding)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM215B Gene

Genomics for FAM215B Gene

Regulatory Elements for FAM215B Gene

Enhancers for FAM215B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G047069 1.5 Ensembl ENCODE 12.3 -508.4 -508409 4.4 CREB3L1 MLX AGO1 ZFP64 DMAP1 YBX1 FEZF1 YY1 SLC30A9 ZNF143 ARL17B MRPL45P2 KANSL1 LOC101927060 CDC27 ENSG00000266601 LRRC37A17P ENSG00000264701 RPS2P47 ENSG00000253347
GH17G045783 1.2 Ensembl ENCODE 12.3 +778.4 778409 2.6 ZNF2 ZNF48 ZNF121 GLIS2 GATA2 KLF7 ZNF263 SP3 SP5 REST LINC02210 FAM215B ENSG00000262539 LRRC37A CRHR1 LOC105371801
GH17G046741 1.3 Ensembl ENCODE 10.3 -179.9 -179924 2.6 ARNT ZFP64 SIN3A FEZF1 ZNF2 FOS SP3 JUNB REST ZNF592 ARL17B MRPL45P2 KANSL1-AS1 ENSG00000253347 ENSG00000262372 RPS7P11 LRRC37A17P KANSL1 NSFP1 RPS2P47
GH17G045936 1 dbSUPER 12.3 +626.0 626008 1.1 ATF1 FOXA2 AGO1 ARID4B DMAP1 ZNF2 YY1 ZNF121 SLC30A9 GLIS2 LINC02210 FAM215B MAPT ENSG00000262539 LOC105371800 GC17P045970
GH17G045989 0.9 dbSUPER 12.3 +572.0 571953 2.2 HDGF PKNOX1 FOXA2 ARNT ZNF2 ZBTB40 TCF12 ZNF121 SMARCA5 MIER1 LINC02210 ARL17A ENSG00000262539 NSFP1 FAM215B LRRC37A2 STH GC17P045976
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAM215B on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM215B Gene

Chromosome:
17
Start:
46,558,830 bp from pter
End:
46,562,795 bp from pter
Size:
3,966 bases
Orientation:
Minus strand

Genomic View for FAM215B Gene

Genes around FAM215B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM215B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM215B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for FAM215B Gene

Proteins for FAM215B Gene

Post-translational modifications for FAM215B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM215B Gene

Domains & Families for FAM215B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM215B Gene

Function for FAM215B Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM215B Gene

Localization for FAM215B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM215B Gene

Pathways & Interactions for FAM215B Gene

SuperPathways for FAM215B Gene

No Data Available

Interacting Proteins for FAM215B Gene

Gene Ontology (GO) - Biological Process for FAM215B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM215B Gene

Drugs & Compounds for FAM215B Gene

No Compound Related Data Available

Transcripts for FAM215B Gene

mRNA/cDNA for FAM215B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM215B Gene

No ASD Table

Relevant External Links for FAM215B Gene

GeneLoc Exon Structure for
FAM215B
ECgene alternative splicing isoforms for
FAM215B

Expression for FAM215B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM215B Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM215B Gene:

FAM215B
genes like me logo Genes that share expression patterns with FAM215B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM215B Gene

Orthologs for FAM215B Gene

Evolution for FAM215B Gene

ENSEMBL:
Gene Tree for FAM215B (if available)
TreeFam:
Gene Tree for FAM215B (if available)

No data available for Orthologs for FAM215B Gene

Paralogs for FAM215B Gene

No data available for Paralogs for FAM215B Gene

Variants for FAM215B Gene

Relevant External Links for FAM215B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM215B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM215B Gene

Disorders for FAM215B Gene

Relevant External Links for FAM215B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM215B

No disorders were found for FAM215B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM215B Gene

Publications for FAM215B Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for FAM215B Gene

Sources for FAM215B Gene

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