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Aliases for FAM212B-AS1 Gene

Subcategory (RNA class) for FAM212B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM212B-AS1 Gene

  • FAM212B Antisense RNA 1 2 3 5

External Ids for FAM212B-AS1 Gene

Previous GeneCards Identifiers for FAM212B-AS1 Gene

  • GC01P112285

Summaries for FAM212B-AS1 Gene

GeneCards Summary for FAM212B-AS1 Gene

FAM212B-AS1 (FAM212B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for FAM212B-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM212B-AS1 Gene

Genomics for FAM212B-AS1 Gene

GeneHancer (GH) Regulatory Elements for FAM212B-AS1 Gene

Promoters and enhancers for FAM212B-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I111731 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 25.5 -3.5 -3460 9.1 PKNOX1 CLOCK FOXA2 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 FAM212B FAM212B-AS1 DDX20 RAP1A C1orf162 GC01M111722
GH01I111754 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 5.9 +16.0 15960 2.7 CLOCK MLX ZFP64 DMAP1 IRF4 YY1 E2F8 ZNF143 SP3 MEF2D DDX20 FAM212B LOC101928718 ST7L DRAM2 DENND2D CAPZA1 CEPT1 FAM212B-AS1
GH01I111748 Enhancer 1.4 Ensembl ENCODE dbSUPER 5.8 +7.6 7629 0.3 ATF1 FOXA2 ARNT ARID4B ZNF2 ZBTB7B IRF4 CBX5 ARID2 ZNF143 ST7L ENSG00000243960 DDX20 CEPT1 DRAM2 WNT2B FAM212B-AS1 FAM212B LOC101928718
GH01I111745 Enhancer 1.2 Ensembl ENCODE dbSUPER 6 +6.5 6498 1.7 ELF3 ATF1 NFIB ARID4B ZNF2 ZBTB40 THAP11 ZNF217 SP1 SSRP1 CEPT1 DRAM2 ENSG00000243960 DDX20 FAM212B-AS1 FAM212B LOC101928718
GH01I111747 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 5.8 +9.3 9280 2.4 CTCF ZFHX2 POLR2A ZNF133 KLF17 EGR2 DDX20 FAM212B-AS1 FAM212B LOC101928718
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FAM212B-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM212B-AS1 Gene

Genomic Locations for FAM212B-AS1 Gene
chr1:111,739,841-111,747,798
(GRCh38/hg38)
Size:
7,958 bases
Orientation:
Plus strand
chr1:112,282,463-112,290,420
(GRCh37/hg19)

Genomic View for FAM212B-AS1 Gene

Genes around FAM212B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM212B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM212B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM212B-AS1 Gene

Proteins for FAM212B-AS1 Gene

Post-translational modifications for FAM212B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM212B-AS1 Gene

Domains & Families for FAM212B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM212B-AS1 Gene

Function for FAM212B-AS1 Gene

Phenotypes From GWAS Catalog for FAM212B-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM212B-AS1 Gene

Localization for FAM212B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM212B-AS1 Gene

Pathways & Interactions for FAM212B-AS1 Gene

SuperPathways for FAM212B-AS1 Gene

No Data Available

Interacting Proteins for FAM212B-AS1 Gene

Gene Ontology (GO) - Biological Process for FAM212B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM212B-AS1 Gene

Drugs & Compounds for FAM212B-AS1 Gene

No Compound Related Data Available

Transcripts for FAM212B-AS1 Gene

mRNA/cDNA for FAM212B-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM212B-AS1 Gene

No ASD Table

Relevant External Links for FAM212B-AS1 Gene

GeneLoc Exon Structure for
FAM212B-AS1
ECgene alternative splicing isoforms for
FAM212B-AS1

Expression for FAM212B-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM212B-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FAM212B-AS1 Gene

This gene is overexpressed in Heart - Atrial Appendage (x5.8) and Heart - Left Ventricle (x4.9).
genes like me logo Genes that share expression patterns with FAM212B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM212B-AS1 Gene

Orthologs for FAM212B-AS1 Gene

Evolution for FAM212B-AS1 Gene

ENSEMBL:
Gene Tree for FAM212B-AS1 (if available)
TreeFam:
Gene Tree for FAM212B-AS1 (if available)

No data available for Orthologs for FAM212B-AS1 Gene

Paralogs for FAM212B-AS1 Gene

No data available for Paralogs for FAM212B-AS1 Gene

Variants for FAM212B-AS1 Gene

Sequence variations from dbSNP and Humsavar for FAM212B-AS1 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000483665 -- 111,744,888(+) A/G intron_variant
rs1000523064 -- 111,741,929(+) T/ intron_variant
rs1000753087 -- 111,745,163(+) G/T intron_variant
rs1000915413 -- 111,740,339(+) G/T intron_variant
rs1001153886 -- 111,742,024(+) T/C intron_variant

Additional Variant Information for FAM212B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM212B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM212B-AS1 Gene

Disorders for FAM212B-AS1 Gene

Additional Disease Information for FAM212B-AS1

No disorders were found for FAM212B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM212B-AS1 Gene

Publications for FAM212B-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for FAM212B-AS1 Gene

Sources for FAM212B-AS1 Gene

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