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Aliases for FAM212B-AS1 Gene

Subcategory (RNA class) for FAM212B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM212B-AS1 Gene

  • FAM212B Antisense RNA 1 2 3 5

External Ids for FAM212B-AS1 Gene

Previous GeneCards Identifiers for FAM212B-AS1 Gene

  • GC01P112285

Summaries for FAM212B-AS1 Gene

GeneCards Summary for FAM212B-AS1 Gene

FAM212B-AS1 (FAM212B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM212B-AS1 Gene

Genomics for FAM212B-AS1 Gene

Regulatory Elements for FAM212B-AS1 Gene

Enhancers for FAM212B-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F111731 1.7 FANTOM5 Ensembl ENCODE 25.5 -3.5 -3488 9.1 PKNOX1 CREB3L1 MLX ZFP64 ARID4B FEZF1 DMAP1 ZNF2 SLC30A9 FOS KCND3-AS1 FAM212B-AS1 HIGD1AP12 NRBF2P3 LOC105378910 DDX20 RAP1A FAM212B C1orf162 GC01M111722
GH01F111745 1.2 Ensembl ENCODE 6 +6.7 6694 2.1 ATF1 ARNT ARID4B ZNF2 CBX5 GATA2 ZNF143 DEK ZNF263 CEBPZ DDX20 ENSG00000243960 FAM212B-AS1
GH01F111754 1.2 ENCODE 5.8 +16.0 15960 2.7 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ENSG00000243960 DDX20 FAM212B-AS1 FAM212B LOC101928718
GH01F111742 1.2 FANTOM5 Ensembl ENCODE 5.6 +3.8 3762 1.6 RFX1 SAP130 TAL1 BHLHE40 TEAD3 ARID1B NCOR1 GATA2 FOS DDX20 FAM212B-AS1 FAM212B
GH01F111747 1.1 FANTOM5 Ensembl ENCODE 5.8 +9.3 9281 2.4 ZFHX2 ZNF133 NRF1 KLF17 ZNF652 EGR2 TRIM28 DDX20 FAM212B-AS1 FAM212B
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAM212B-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for FAM212B-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000542709 -341 3000 PKNOX1 CREB3L1 MLX ZFP64 ARID4B DMAP1 ZNF2 SLC30A9 FOS ZNF263

Genomic Location for FAM212B-AS1 Gene

Chromosome:
1
Start:
111,739,841 bp from pter
End:
111,747,798 bp from pter
Size:
7,958 bases
Orientation:
Plus strand

Genomic View for FAM212B-AS1 Gene

Genes around FAM212B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM212B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM212B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM212B-AS1 Gene

Proteins for FAM212B-AS1 Gene

Post-translational modifications for FAM212B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM212B-AS1 Gene

Domains & Families for FAM212B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM212B-AS1 Gene

Function for FAM212B-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM212B-AS1 Gene

Localization for FAM212B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM212B-AS1 Gene

Pathways & Interactions for FAM212B-AS1 Gene

SuperPathways for FAM212B-AS1 Gene

No Data Available

Interacting Proteins for FAM212B-AS1 Gene

Gene Ontology (GO) - Biological Process for FAM212B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM212B-AS1 Gene

Transcripts for FAM212B-AS1 Gene

mRNA/cDNA for FAM212B-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM212B-AS1 Gene

No ASD Table

Relevant External Links for FAM212B-AS1 Gene

GeneLoc Exon Structure for
FAM212B-AS1
ECgene alternative splicing isoforms for
FAM212B-AS1

Expression for FAM212B-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FAM212B-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for FAM212B-AS1 Gene

This gene is overexpressed in Heart - Atrial Appendage (x5.8) and Heart - Left Ventricle (x4.9).
genes like me logo Genes that share expression patterns with FAM212B-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FAM212B-AS1 Gene

Orthologs for FAM212B-AS1 Gene

Evolution for FAM212B-AS1 Gene

ENSEMBL:
Gene Tree for FAM212B-AS1 (if available)
TreeFam:
Gene Tree for FAM212B-AS1 (if available)

No data available for Orthologs for FAM212B-AS1 Gene

Paralogs for FAM212B-AS1 Gene

No data available for Paralogs for FAM212B-AS1 Gene

Variants for FAM212B-AS1 Gene

Sequence variations from dbSNP and Humsavar for FAM212B-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs10571384 -- 111,745,293(+) tatat(A/T)ttttt intron-variant, downstream-variant-500B
rs10857903 -- 111,740,940(+) GCACT(C/T)TAGCC intron-variant, upstream-variant-2KB
rs11102330 -- 111,740,970(+) TCCGT(C/T)TAAAA intron-variant, upstream-variant-2KB
rs112059297 -- 111,743,118(+) CTGGG(C/G/T)ATGGG intron-variant
rs112943893 -- 111,738,671(+) GGGGG(C/T)CCAGG intron-variant, upstream-variant-2KB

Relevant External Links for FAM212B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM212B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM212B-AS1 Gene

Disorders for FAM212B-AS1 Gene

Relevant External Links for FAM212B-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM212B-AS1

No disorders were found for FAM212B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM212B-AS1 Gene

Publications for FAM212B-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for FAM212B-AS1 Gene

Sources for FAM212B-AS1 Gene

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