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Aliases for FAM210A Gene

Aliases for FAM210A Gene

  • Family With Sequence Similarity 210, Member A 2 3
  • C18orf19 3 4
  • Chromosome 18 Open Reading Frame 19 2
  • Uncharacterized Protein C18orf19 3
  • Protein FAM210A 3
  • HsT2329 3

External Ids for FAM210A Gene

Previous Symbols for FAM210A Gene

  • C18orf19

Summaries for FAM210A Gene

GeneCards Summary for FAM210A Gene

FAM210A (Family With Sequence Similarity 210, Member A) is a Protein Coding gene. An important paralog of this gene is FAM210B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM210A Gene

Genomics for FAM210A Gene

Genomic Location for FAM210A Gene

Start:
13,663,347 bp from pter
End:
13,726,663 bp from pter
Size:
63,317 bases
Orientation:
Minus strand

Genomic View for FAM210A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM210A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM210A Gene

No data available for Regulatory Elements for FAM210A Gene

Proteins for FAM210A Gene

  • Protein details for FAM210A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96ND0-F210A_HUMAN
    Recommended name:
    Protein FAM210A
    Protein Accession:
    Q96ND0
    Secondary Accessions:
    • D3DUJ4

    Protein attributes for FAM210A Gene

    Size:
    272 amino acids
    Molecular mass:
    30777 Da
    Quaternary structure:
    • Interacts with ATAD3A.

neXtProt entry for FAM210A Gene

Proteomics data for FAM210A Gene at MOPED

Post-translational modifications for FAM210A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FAM210A Gene

No data available for DME Specific Peptides for FAM210A Gene

Domains for FAM210A Gene

Protein Domains for FAM210A Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

F210A_HUMAN
Domain:
  • Contains 1 DUF1279 domain.:
    • Q96ND0
Family:
  • Belongs to the FAM210 family.:
    • Q96ND0
genes like me logo Genes that share domains with FAM210A: view

No data available for Gene Families for FAM210A Gene

Function for FAM210A Gene

miRNA for FAM210A Gene

miRTarBase miRNAs that target FAM210A

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for FAM210A Gene

Localization for FAM210A Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM210A Gene

Membrane; Single-pass membrane protein. Mitochondrion.

Gene Ontology (GO) - Cellular Components for FAM210A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005739 mitochondrion IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with FAM210A: view

Pathways for FAM210A Gene

SuperPathways for FAM210A Gene

No Data Available

Interacting Proteins for FAM210A Gene

STRING Interaction Network Preview (showing 3 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000323635%0d%0a9606.ENSP00000352408%0d%0a9606.ENSP00000302967%0d%0a9606.ENSP00000227251%0d%0a
Selected Interacting proteins: ENSP00000323635 Q96ND0-F210A_HUMAN for FAM210A Gene via STRING I2D

Gene Ontology (GO) - Biological Process for FAM210A Gene

None

No data available for Pathways by source for FAM210A Gene

Transcripts for FAM210A Gene

Unigene Clusters for FAM210A Gene

Family with sequence similarity 210, member A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM210A Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4a · 4b · 4c
SP1:
SP2: -
SP3: - - -

Relevant External Links for FAM210A Gene

GeneLoc Exon Structure for
FAM210A
ECgene alternative splicing isoforms for
FAM210A

Expression for FAM210A Gene

mRNA expression in normal human tissues for FAM210A Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for FAM210A Gene

SOURCE GeneReport for Unigene cluster for FAM210A Gene Hs.13034

genes like me logo Genes that share expressions with FAM210A: view

Orthologs for FAM210A Gene

This gene was present in the common ancestor of animals.

Orthologs for FAM210A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FAM210A 36
  • 99.88 (n)
  • 100 (a)
FAM210A 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia FAM210A 36
  • 84.56 (n)
  • 83.46 (a)
FAM210A 37
  • 83 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM210A 36
  • 87.62 (n)
  • 86.76 (a)
FAM210A 37
  • 86 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fam210a 36
  • 80.51 (n)
  • 77.94 (a)
Fam210a 16
Fam210a 37
  • 78 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia FAM210A 37
  • 75 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia FAM210A 37
  • 67 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fam210a 36
  • 81.62 (n)
  • 77.94 (a)
chicken
(Gallus gallus)
Aves C2H18ORF19 36
  • 69.77 (n)
  • 63.95 (a)
FAM210A 37
  • 59 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia FAM210A 37
  • 53 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.7564 36
tropical clawed frog
(Silurana tropicalis)
Amphibia fam210a 36
  • 62.98 (n)
  • 61.7 (a)
Str.9203 36
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.4600 36
zebrafish
(Danio rerio)
Actinopterygii fam210a 37
  • 45 (a)
OneToMany
FAM210A (1 of 2) 37
  • 50 (a)
OneToMany
si:ch211-105d11.2 36
  • 69.3 (n)
  • 73.16 (a)
wufi06g08 36
fruit fly
(Drosophila melanogaster)
Insecta CG14613 37
  • 28 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea Y56A3A.22 37
  • 20 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 24 (a)
OneToOne
Species with no ortholog for FAM210A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for FAM210A Gene

ENSEMBL:
Gene Tree for FAM210A (if available)
TreeFam:
Gene Tree for FAM210A (if available)

Paralogs for FAM210A Gene

Paralogs for FAM210A Gene

genes like me logo Genes that share paralogs with FAM210A: view

Variants for FAM210A Gene

Sequence variations from dbSNP and Humsavar for FAM210A Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type MAF
rs948276 -- 13,665,590(+) CATGA(A/C)AACCT utr-variant-3-prime, downstream-variant-500B
rs948277 -- 13,665,687(+) AATTT(A/C)AGGTT utr-variant-3-prime
rs948726 -- 13,714,985(+) GGTTA(G/T)TGAAG intron-variant
rs948727 -- 13,715,335(+) AAGTG(A/G)TCCTC intron-variant
rs1010923 -- 13,719,292(-) TTTAA(C/T)GTAAG intron-variant

Relevant External Links for FAM210A Gene

HapMap Linkage Disequilibrium report
FAM210A

No data available for Structural Variations from Database of Genomic Variants (DGV) for FAM210A Gene

Disorders for FAM210A Gene

No disorders were found for FAM210A Gene.

No data available for UniProtKB/Swiss-Prot for FAM210A Gene

Publications for FAM210A Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3 4
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Defining the human deubiquitinating enzyme interaction landscape. (PMID: 19615732) Sowa M.E. … Harper J.W. (Cell 2009) 3
  4. Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression. (PMID: 20877624) Hendrickson S.L. … O'Brien S.J. (PLoS ONE 2010) 3
  5. Genome-wide meta-analysis identifies 56 bone mineral density loci and reveals 14 loci associated with risk of fracture. (PMID: 22504420) Estrada K. … Rivadeneira F. (Nat. Genet. 2012) 3

Products for FAM210A Gene

Sources for FAM210A Gene

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