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Aliases for FAM205C Gene

Aliases for FAM205C Gene

  • Family With Sequence Similarity 205 Member C 2 3 5
  • Family With Sequence Similarity 205, Member C, Pseudogene 2 3
  • FAM205C Pseudogene 3 4
  • FAM205CP 3 4
  • Putative Family With Sequence Similarity 205, Member C Protein 3
  • Family With Sequence Similarity 205, Member C 2
  • Transmembrane Protein C9orf144B Pseudogene 3
  • Protein FAM205CP 3
  • Protein FAM205C 3

External Ids for FAM205C Gene

Previous HGNC Symbols for FAM205C Gene

  • FAM205CP

Summaries for FAM205C Gene

GeneCards Summary for FAM205C Gene

FAM205C (Family With Sequence Similarity 205 Member C) is a Protein Coding gene. An important paralog of this gene is FAM205A.

Additional gene information for FAM205C Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM205C Gene

Genomics for FAM205C Gene

GeneHancer (GH) Regulatory Elements for FAM205C Gene

Promoters and enhancers for FAM205C Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I034987 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 5.2 -97.5 -97502 10.6 HDGF PKNOX1 CLOCK SMAD1 ARID4B SIN3A YY1 ZNF207 ZNF143 FOS DNAJB5 UBAP2 VCP FANCG PIGO FAM205A C9orf131 ATP8B5P RPP25L FAM205C
GH09I035257 Enhancer 1 Ensembl ENCODE 4.6 -362.6 -362581 1.5 ELF3 FOXA2 ARID4B RAD21 YY1 ZNF143 CREM THAP11 MIXL1 ZNF654 UNC13B STOML2 PIGO ENSG00000234181 FAM214B FAM205C GC09M035186 ENSG00000279083
GH09I035236 Enhancer 0.5 ENCODE 4.5 -341.4 -341400 1.9 TCF12 CTBP1 L3MBTL2 CBFA2T3 MGA FAM205C GC09M035186 UNC13B ENSG00000279083
GH09I035334 Enhancer 0.4 ENCODE 4.2 -439.6 -439573 1.4 JUN MYC FAM205C ENSG00000279083 GC09M035186 UNC13B
GH09I034899 Enhancer 0.7 ENCODE 0.8 -4.0 -3971 0.2 MEIS2 CTCF PKNOX1 ZNF654 TRIM22 MAX SIN3A REST IRF4 RAD21 PHF24 VCP FANCG PIGO ENSG00000234181 STOML2 CCL19 FAM205C GLULP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FAM205C on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM205C Gene

Genomic Locations for FAM205C Gene
chr9:34,889,064-34,895,778
(GRCh38/hg38)
Size:
6,715 bases
Orientation:
Minus strand
chr9:34,889,061-34,895,775
(GRCh37/hg19)

Genomic View for FAM205C Gene

Genes around FAM205C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM205C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM205C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM205C Gene

Proteins for FAM205C Gene

  • Protein details for FAM205C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NFA0-F205C_HUMAN
    Recommended name:
    Protein FAM205C
    Protein Accession:
    A6NFA0

    Protein attributes for FAM205C Gene

    Size:
    338 amino acids
    Molecular mass:
    37613 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM205C Gene

Post-translational modifications for FAM205C Gene

No Post-translational modifications

Other Protein References for FAM205C Gene

No data available for DME Specific Peptides for FAM205C Gene

Domains & Families for FAM205C Gene

Gene Families for FAM205C Gene

Human Protein Atlas (HPA):
  • Predicted membrane proteins

Protein Domains for FAM205C Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM205C: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM205C Gene

Function for FAM205C Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM205C Gene

Localization for FAM205C Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM205C Gene

Membrane; Single-pass membrane protein.

Gene Ontology (GO) - Cellular Components for FAM205C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with FAM205C: view

No data available for Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for FAM205C Gene

Pathways & Interactions for FAM205C Gene

SuperPathways for FAM205C Gene

No Data Available

Interacting Proteins for FAM205C Gene

Gene Ontology (GO) - Biological Process for FAM205C Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM205C Gene

Drugs & Compounds for FAM205C Gene

No Compound Related Data Available

Transcripts for FAM205C Gene

mRNA/cDNA for FAM205C Gene

(4) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM205C Gene

No ASD Table

Relevant External Links for FAM205C Gene

GeneLoc Exon Structure for
FAM205C
ECgene alternative splicing isoforms for
FAM205C

Expression for FAM205C Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM205C Gene:

FAM205C
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM205C Gene

Orthologs for FAM205C Gene

Evolution for FAM205C Gene

ENSEMBL:
Gene Tree for FAM205C (if available)
TreeFam:
Gene Tree for FAM205C (if available)

No data available for Orthologs for FAM205C Gene

Paralogs for FAM205C Gene

Paralogs for FAM205C Gene

genes like me logo Genes that share paralogs with FAM205C: view

Variants for FAM205C Gene

Sequence variations from dbSNP and Humsavar for FAM205C Gene

SNP ID Clin Chr 09 pos Variation AA Info Type
rs1000029920 -- 34,895,036(-) T/C/G intron_variant
rs1000079999 -- 34,889,249(-) A/G 3_prime_UTR_variant
rs1001089294 -- 34,893,981(-) G/A intron_variant
rs1001737675 -- 34,893,450(-) A/C intron_variant
rs1001884607 -- 34,893,654(-) G/A intron_variant

Additional Variant Information for FAM205C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM205C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM205C Gene

Disorders for FAM205C Gene

Additional Disease Information for FAM205C

No disorders were found for FAM205C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM205C Gene

Publications for FAM205C Gene

  1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray SJ … Dunham I (Nature 2004) 3 4 58

Products for FAM205C Gene

Sources for FAM205C Gene

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