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Aliases for FAM205C Gene

Aliases for FAM205C Gene

  • Family With Sequence Similarity 205 Member C 2 3 5
  • Family With Sequence Similarity 205, Member C, Pseudogene 2 3
  • FAM205C Pseudogene 3 4
  • FAM205CP 3 4
  • Putative Family With Sequence Similarity 205, Member C Protein 3
  • Family With Sequence Similarity 205, Member C 2
  • Transmembrane Protein C9orf144B Pseudogene 3
  • Protein FAM205CP 3
  • Protein FAM205C 3

External Ids for FAM205C Gene

Previous HGNC Symbols for FAM205C Gene

  • FAM205CP

Summaries for FAM205C Gene

GeneCards Summary for FAM205C Gene

FAM205C (Family With Sequence Similarity 205 Member C) is a Protein Coding gene. An important paralog of this gene is FAM205A.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM205C Gene

Genomics for FAM205C Gene

Regulatory Elements for FAM205C Gene

Enhancers for FAM205C Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F034987 1.1 FANTOM5 ENCODE 5.2 -97.5 -97502 10.6 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF207 ZNF143 FOS FANCG YBX1P10 CCL21 VCP PIGO RGP1 DNAJB5 RPP25L FAM205C IL11RA
GH09F035257 1 Ensembl ENCODE 4.6 -362.7 -362685 1.7 ELF3 ATF1 ARID4B DMAP1 THRB RAD21 YY1 KAT2B CREM THAP11 UNC13B STOML2 ENSG00000234181 PIGO FAM214B FAM205C GC09M035186 ENSG00000279083
GH09F035236 0.6 ENCODE 4.5 -341.4 -341401 1.9 L3MBTL2 RNF2 E2F6 MYC MGA FAM205C GC09M035186 ENSG00000279083
GH09F035334 0.7 ENCODE 4.2 -439.6 -439574 1.4 JUN MYC FAM205C ENSG00000279083 GC09M035186
GH09F034899 0.2 ENCODE 0.8 -4.0 -3971 0.2 CTCF ZNF654 PKNOX1 MAX TRIM22 REST RAD21 RFX5 ZNF143 ZNF580 PHF24 VCP FANCG ENSG00000234181 PIGO STOML2 CCL19 FAM205C GLULP4
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FAM205C on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM205C Gene

Chromosome:
9
Start:
34,889,064 bp from pter
End:
34,895,778 bp from pter
Size:
6,715 bases
Orientation:
Minus strand

Genomic View for FAM205C Gene

Genes around FAM205C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM205C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM205C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM205C Gene

Proteins for FAM205C Gene

  • Protein details for FAM205C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NFA0-F205C_HUMAN
    Recommended name:
    Protein FAM205C
    Protein Accession:
    A6NFA0

    Protein attributes for FAM205C Gene

    Size:
    338 amino acids
    Molecular mass:
    37613 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM205C Gene

Post-translational modifications for FAM205C Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FAM205C Gene

No data available for DME Specific Peptides for FAM205C Gene

Domains & Families for FAM205C Gene

Protein Domains for FAM205C Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM205C: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM205C Gene

Function for FAM205C Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM205C Gene

Localization for FAM205C Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM205C Gene

Membrane; Single-pass membrane protein.

Gene Ontology (GO) - Cellular Components for FAM205C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with FAM205C: view

No data available for Subcellular locations from COMPARTMENTS for FAM205C Gene

Pathways & Interactions for FAM205C Gene

SuperPathways for FAM205C Gene

No Data Available

Interacting Proteins for FAM205C Gene

Gene Ontology (GO) - Biological Process for FAM205C Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM205C Gene

Transcripts for FAM205C Gene

mRNA/cDNA for FAM205C Gene

(4) REFSEQ mRNAs :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM205C Gene

No ASD Table

Relevant External Links for FAM205C Gene

GeneLoc Exon Structure for
FAM205C
ECgene alternative splicing isoforms for
FAM205C

Expression for FAM205C Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM205C Gene:

FAM205C
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FAM205C Gene

Orthologs for FAM205C Gene

Evolution for FAM205C Gene

ENSEMBL:
Gene Tree for FAM205C (if available)
TreeFam:
Gene Tree for FAM205C (if available)

No data available for Orthologs for FAM205C Gene

Paralogs for FAM205C Gene

Paralogs for FAM205C Gene

genes like me logo Genes that share paralogs with FAM205C: view

Variants for FAM205C Gene

Sequence variations from dbSNP and Humsavar for FAM205C Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs10123308 -- 34,890,142(+) AAGAA(A/G)GATCC intron-variant
rs10429551 -- 34,893,219(+) TGGGC(C/T)GGGGT intron-variant
rs10814178 -- 34,891,320(+) GAACC(A/G)GTGAT intron-variant
rs111377285 -- 34,893,602(+) GTCTC(-/A)AAAAA intron-variant
rs112238859 -- 34,888,722(+) CATCA(A/G)TGAAT intron-variant, downstream-variant-500B

Relevant External Links for FAM205C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM205C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM205C Gene

Disorders for FAM205C Gene

Relevant External Links for FAM205C

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM205C

No disorders were found for FAM205C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM205C Gene

Publications for FAM205C Gene

  1. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 3 4 64

Products for FAM205C Gene

Sources for FAM205C Gene

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