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Aliases for FAM204A Gene

Aliases for FAM204A Gene

  • Family With Sequence Similarity 204, Member A 2 3
  • C10orf84 3 4
  • Chromosome 10 Open Reading Frame 84 2
  • Protein FAM204A 3
  • BA319I23.1 3

External Ids for FAM204A Gene

Previous Symbols for FAM204A Gene

  • C10orf84

Summaries for FAM204A Gene

GeneCards Summary for FAM204A Gene

FAM204A (Family With Sequence Similarity 204, Member A) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM204A Gene

Genomics for FAM204A Gene

Genomic Location for FAM204A Gene

Start:
118,297,930 bp from pter
End:
118,342,328 bp from pter
Size:
44,399 bases
Orientation:
Minus strand

Genomic View for FAM204A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM204A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM204A Gene

No data available for Regulatory Elements for FAM204A Gene

Proteins for FAM204A Gene

  • Protein details for FAM204A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H8W3-F204A_HUMAN
    Recommended name:
    Protein FAM204A
    Protein Accession:
    Q9H8W3
    Secondary Accessions:
    • D3DRC6
    • Q5T373
    • Q9H5V5

    Protein attributes for FAM204A Gene

    Size:
    233 amino acids
    Molecular mass:
    27021 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM204A Gene

Proteomics data for FAM204A Gene at MOPED

Post-translational modifications for FAM204A Gene

No Post-translational modifications

Other Protein References for FAM204A Gene

No data available for DME Specific Peptides for FAM204A Gene

Domains for FAM204A Gene

Protein Domains for FAM204A Gene

ProtoNet:

Suggested Antigen Peptide Sequences for FAM204A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM204A: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FAM204A Gene

Function for FAM204A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM204A Gene

Localization for FAM204A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM204A Gene

Pathways for FAM204A Gene

SuperPathways for FAM204A Gene

No Data Available

Interacting Proteins for FAM204A Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000358170%0d%0a9606.ENSP00000344818%0d%0a
Selected Interacting proteins: ENSP00000358170 Q9H8W3-F204A_HUMAN for FAM204A Gene via STRING I2D

Gene Ontology (GO) - Biological Process for FAM204A Gene

None

No data available for Pathways by source for FAM204A Gene

Transcripts for FAM204A Gene

Unigene Clusters for FAM204A Gene

Family with sequence similarity 204, member A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM204A Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3 ^ 4a · 4b · 4c · 4d ^ 5a · 5b ^ 6 ^ 7 ^ 8a · 8b ^ 9 ^ 10 ^ 11a · 11b
SP1: - - - -
SP2: - - - - -
SP3: - - - -
SP4: - - - -
SP5: - -
SP6: - - - - -
SP7: -
SP8: - - -
SP9: -
SP10: - -
SP11: -

Relevant External Links for FAM204A Gene

GeneLoc Exon Structure for
FAM204A
ECgene alternative splicing isoforms for
FAM204A

Expression for FAM204A Gene

mRNA expression in normal human tissues for FAM204A Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for FAM204A Gene

SOURCE GeneReport for Unigene cluster for FAM204A Gene Hs.372309

genes like me logo Genes that share expressions with FAM204A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM204A Gene

Orthologs for FAM204A Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM204A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FAM204A 35
  • 99.57 (n)
  • 99.57 (a)
FAM204A 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia FAM204A 35
  • 87.27 (n)
  • 83.26 (a)
FAM204A 36
  • 83 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM204A 35
  • 88.13 (n)
  • 83.26 (a)
FAM204A 36
  • 76 (a)
OneToOne
mouse
(Mus musculus)
Mammalia D19Ertd737e 35
  • 85.12 (n)
  • 79.83 (a)
D19Ertd737e 16
D19Ertd737e 36
  • 79 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 65 (a)
OneToMany
-- 36
  • 65 (a)
OneToMany
-- 36
  • 47 (a)
OneToMany
-- 36
  • 64 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia FAM204A 36
  • 64 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Fam204a 35
  • 83.69 (n)
  • 76.82 (a)
chicken
(Gallus gallus)
Aves FAM204A 35
  • 63.77 (n)
  • 55.22 (a)
FAM204A 36
  • 53 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia FAM204A 36
  • 55 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii Dr.18811 35
fam204a 35
  • 56.98 (n)
  • 47.14 (a)
fam204a 36
  • 43 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea CSA.900 36
  • 29 (a)
OneToOne
Species with no ortholog for FAM204A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FAM204A Gene

ENSEMBL:
Gene Tree for FAM204A (if available)
TreeFam:
Gene Tree for FAM204A (if available)

Paralogs for FAM204A Gene

Selected SIMAP similar genes for FAM204A Gene using alignment to 3 proteins:

Pseudogenes.org Pseudogenes for FAM204A Gene

genes like me logo Genes that share paralogs with FAM204A: view

No data available for Paralogs for FAM204A Gene

Variants for FAM204A Gene

Sequence variations from dbSNP and Humsavar for FAM204A Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs171025 -- 118,327,265(+) TGAGA(A/G)AATTT intron-variant
rs192098 -- 118,319,994(-) GATGG(C/T)AGAAA intron-variant
rs236190 -- 118,317,706(-) CTTCC(C/T)AAGTA intron-variant
rs236191 -- 118,318,553(+) CCTTT(C/T)CGCAG intron-variant
rs236192 -- 118,319,520(-) GTACC(C/G)TCTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM204A Gene

Variant ID Type Subtype PubMed ID
esv2741561 CNV Deletion 23290073
esv2741572 CNV Deletion 23290073
esv2741584 CNV Deletion 23290073

Relevant External Links for FAM204A Gene

HapMap Linkage Disequilibrium report
FAM204A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for FAM204A Gene

Disorders for FAM204A Gene

No disorders were found for FAM204A Gene.

No data available for UniProtKB/Swiss-Prot for FAM204A Gene

Publications for FAM204A Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh J.H. … Kim N.S. (Mamm. Genome 2005) 3
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for FAM204A Gene

Sources for FAM204A Gene

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