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FAM201B Gene(RNA Gene)

Family With Sequence Similarity 201 Member B

GCID:
GC02P132352
GIFtS:
21
Genes Participants
UDN Logo

Aliases for FAM201B Gene

Subcategory (RNA class) for FAM201B Gene

ncRNA

Quality Score for this RNA gene is

3

Aliases for FAM201B Gene

  • Family With Sequence Similarity 201 Member B 2 3 5
  • Family With Sequence Similarity 201, Member B 2

External Ids for FAM201B Gene

Previous GeneCards Identifiers for FAM201B Gene

  • GC02P133106
  • GC02P132351

Summaries for FAM201B Gene

GeneCards Summary for FAM201B Gene

FAM201B (Family With Sequence Similarity 201 Member B) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM201B Gene

Genomics for FAM201B Gene

Products:

  1. Regulatory Element

Regulatory Elements for FAM201B Gene

Enhancers for FAM201B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G132264 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12 -82.9 -82946 9.7 HDGF PKNOX1 ARNT ZFP64 SIN3A YBX1 ZBTB7B YY1 CBX5 ZNF143 LOC150776 FAM201B ENSG00000213222 ZNF806 ENSG00000272769 C2orf27A LOC105373622 GC02P132278
GH02G132352 1.3 FANTOM5 ENCODE 8.5 +0.4 444 1.6 SIN3A DMAP1 ZNF48 ZBTB7B GLIS2 ZNF207 ZNF263 MXD4 REST ZNF592 RNU6-175P GPR39 FAM201B LOC150776 GC02M132367 GC02P132353
GH02G132383 0.7 Ensembl 8.2 +31.9 31857 1.1 PKNOX1 MTA2 TAL1 NR2F1 FOXA1 GATA3 POLR2A SMARCA4 GATA2 IKZF1 GPR39 RNU6-175P FAM201B GC02M132407 GC02M132367
GH02G132406 0.2 ENCODE 4.4 +55.6 55620 2.3 GPR39 FAM201B RNU6-175P GC02M132407
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around FAM201B on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM201B Gene

Chromosome:
2
Start:
132,352,499 bp from pter
End:
132,354,283 bp from pter
Size:
1,785 bases
Orientation:
Plus strand

Genomic View for FAM201B Gene

Genes around FAM201B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM201B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM201B Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for FAM201B Gene

Proteins for FAM201B Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for FAM201B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM201B Gene

Domains & Families for FAM201B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM201B Gene

Function for FAM201B Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM201B Gene

Localization for FAM201B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM201B Gene

Pathways & Interactions for FAM201B Gene

SuperPathways for FAM201B Gene

PathCards logo More details on SuperPathways for FAM201B
No Data Available

Interacting Proteins for FAM201B Gene

Gene Ontology (GO) - Biological Process for FAM201B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM201B Gene

Drugs & Compounds for FAM201B Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for FAM201B Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for FAM201B Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM201B Gene

Family with sequence similarity 201, member B:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM201B Gene

No ASD Table

Relevant External Links for FAM201B Gene

GeneLoc Exon Structure for
FAM201B
ECgene alternative splicing isoforms for
FAM201B

Expression for FAM201B Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM201B Gene

mRNA expression in normal human tissues for FAM201B Gene
mRNA expression by BioGPS for FAM201B GenemRNA expression by GTEx for FAM201B Gene

mRNA differential expression in normal tissues according to GTEx for FAM201B Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of FAM201B Gene:

FAM201B

SOURCE GeneReport for Unigene cluster for FAM201B Gene:

Hs.98178
genes like me logo Genes that share expression patterns with FAM201B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM201B Gene

Orthologs for FAM201B Gene

Evolution for FAM201B Gene

ENSEMBL:
Gene Tree for FAM201B (if available)
TreeFam:
Gene Tree for FAM201B (if available)

No data available for Orthologs for FAM201B Gene

Paralogs for FAM201B Gene

No data available for Paralogs for FAM201B Gene

Variants for FAM201B Gene

Sequence variations from dbSNP and Humsavar for FAM201B Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000900434 -- 132,354,511(+) TTGTA(A/G)GATCT downstream-variant-500B
rs1002857681 -- 132,351,758(+) GTAAA(C/T)ACACA upstream-variant-2KB
rs1003993366 -- 132,353,183(+) GCCCG(C/T)CCGCA nc-transcript-variant
rs1005106625 -- 132,350,692(+) CCTGT(A/C)GCTTG upstream-variant-2KB
rs1005814208 -- 132,353,919(+) GTGGC(A/G)TCTCA nc-transcript-variant

Relevant External Links for FAM201B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM201B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM201B Gene

Disorders for FAM201B Gene

Relevant External Links for FAM201B

Genetic Association Database (GAD)
FAM201B
Human Genome Epidemiology (HuGE) Navigator
FAM201B
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM201B

No disorders were found for FAM201B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM201B Gene

Publications for FAM201B Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
  2. Genome-wide association study of conduct disorder symptomatology. (PMID: 20585324) Dick D.M. … Bierut L. (Mol. Psychiatry 2011) 46 64
  3. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 64

Products for FAM201B Gene

Sources for FAM201B Gene

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