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FAM201B Gene(RNA Gene)

Family With Sequence Similarity 201 Member B

GCID:
GC02P132352
GIFtS:
15
Genes Participants
UDN Logo

Aliases for FAM201B Gene

Subcategory (RNA class) for FAM201B Gene

ncRNA

Quality Score for this RNA gene is

3

Aliases for FAM201B Gene

  • Family With Sequence Similarity 201 Member B 2 3 5
  • Family With Sequence Similarity 201, Member B 2

External Ids for FAM201B Gene

Previous GeneCards Identifiers for FAM201B Gene

  • GC02P133106
  • GC02P132351

Summaries for FAM201B Gene

GeneCards Summary for FAM201B Gene

FAM201B (Family With Sequence Similarity 201 Member B) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for FAM201B Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM201B Gene

Genomics for FAM201B Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for FAM201B Gene

Promoters and enhancers for FAM201B Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH02I132352 Enhancer 1.2 FANTOM5 ENCODE 558.5 +0.4 444 1.6 SIN3A DMAP1 ZBTB7B ZNF48 GLIS2 ZNF207 MXD4 REST ZNF592 GLIS1 FAM201B GC02M132380 GC02P132353 GC02P132354 RNU6-175P GPR39 LOC150776
GH02I132264 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.5 -82.9 -82946 9.7 HDGF PKNOX1 SMAD1 ARNT ZFP64 NEUROD1 SIN3A YBX1 ZBTB7B YY1 LOC105373622 LOC150776 ENSG00000272769 ZNF806 FAM201B ENSG00000213222 CCDC74A C2orf27A GC02P132278
GH02I132383 Enhancer 0.5 Ensembl 8.2 +31.9 31856 1.1 GATA3 GATA2 POLR2A TEAD4 CBFA2T3 FOXA1 SPI1 GPR39 RNU6-175P FAM201B GC02M132407 GC02M132380
GH02I132406 Enhancer 0.2 ENCODE 4.4 +55.6 55620 2.3 GC02M132407 RNU6-175P GPR39 FAM201B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around FAM201B on UCSC Golden Path with GeneCards custom track

Genomic Locations for FAM201B Gene

Genomic Locations for FAM201B Gene
chr2:132,352,499-132,354,283
(GRCh38/hg38)
Size:
1,785 bases
Orientation:
Plus strand
chr2:133,110,240-133,112,412
(GRCh37/hg19)

Genomic View for FAM201B Gene

Genes around FAM201B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM201B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM201B Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for FAM201B Gene

Proteins for FAM201B Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for FAM201B Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM201B Gene

Domains & Families for FAM201B Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM201B Gene

Function for FAM201B Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for FAM201B Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM201B Gene

Localization for FAM201B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for FAM201B Gene

Pathways & Interactions for FAM201B Gene

SuperPathways for FAM201B Gene

PathCards logo More details on SuperPathways for FAM201B
No Data Available

Interacting Proteins for FAM201B Gene

Gene Ontology (GO) - Biological Process for FAM201B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM201B Gene

Drugs & Compounds for FAM201B Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for FAM201B Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for FAM201B Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for FAM201B Gene

Family with sequence similarity 201, member B:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM201B Gene

No ASD Table

Relevant External Links for FAM201B Gene

GeneLoc Exon Structure for
FAM201B
ECgene alternative splicing isoforms for
FAM201B

Expression for FAM201B Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM201B Gene

mRNA expression in normal human tissues for FAM201B Gene
mRNA expression by BioGPS for FAM201B GenemRNA expression by GTEx for FAM201B Gene

mRNA differential expression in normal tissues according to GTEx for FAM201B Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (x4.4).

NURSA nuclear receptor signaling pathways regulating expression of FAM201B Gene:

FAM201B

SOURCE GeneReport for Unigene cluster for FAM201B Gene:

Hs.98178
genes like me logo Genes that share expression patterns with FAM201B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM201B Gene

Orthologs for FAM201B Gene

Evolution for FAM201B Gene

ENSEMBL:
Gene Tree for FAM201B (if available)
TreeFam:
Gene Tree for FAM201B (if available)

No data available for Orthologs for FAM201B Gene

Paralogs for FAM201B Gene

No data available for Paralogs for FAM201B Gene

Variants for FAM201B Gene

Sequence variations from dbSNP and Humsavar for FAM201B Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000900434 -- 132,354,511(+) G/A downstream_transcript_variant
rs1002857681 -- 132,351,758(+) T/C upstream_transcript_variant
rs1003993366 -- 132,353,183(+) C/T non_coding_transcript_variant
rs1005106625 -- 132,350,692(+) A/C upstream_transcript_variant
rs1005814208 -- 132,353,919(+) A/G non_coding_transcript_variant

Additional Variant Information for FAM201B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM201B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for FAM201B Gene

Disorders for FAM201B Gene

Additional Disease Information for FAM201B

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for FAM201B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM201B Gene

Publications for FAM201B Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 2 3 58
  2. Genome-wide association study of conduct disorder symptomatology. (PMID: 20585324) Dick DM … Bierut L (Molecular psychiatry 2011) 44 58
  3. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose JE … Uhl GR (Molecular medicine (Cambridge, Mass.) 2010) 3 58

Products for FAM201B Gene

Sources for FAM201B Gene

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