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Aliases for FAM200A Gene

Aliases for FAM200A Gene

  • Family With Sequence Similarity 200 Member A 2 3 5
  • Family With Sequence Similarity 200, Member A 2 3
  • C7orf38 3 4
  • Chromosome 7 Open Reading Frame 38 2

External Ids for FAM200A Gene

Previous HGNC Symbols for FAM200A Gene

  • C7orf38

Previous GeneCards Identifiers for FAM200A Gene

  • GC07M099143
  • GC07M093780

Summaries for FAM200A Gene

Entrez Gene Summary for FAM200A Gene

  • This gene encodes a protein of unknown function. The protein is weakly similar to transposase-like proteins in human and mouse. [provided by RefSeq, Jul 2008]

GeneCards Summary for FAM200A Gene

FAM200A (Family With Sequence Similarity 200 Member A) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZBED5.

Gene Wiki entry for FAM200A Gene

No data available for UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM200A Gene

Genomics for FAM200A Gene

Regulatory Elements for FAM200A Gene

Enhancers for FAM200A Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around FAM200A on UCSC Golden Path with GeneCards custom track

Promoters for FAM200A Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around FAM200A on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM200A Gene

99,546,300 bp from pter
99,559,395 bp from pter
13,096 bases
Minus strand

Genomic View for FAM200A Gene

Genes around FAM200A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM200A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM200A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM200A Gene

Proteins for FAM200A Gene

  • Protein details for FAM200A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Protein FAM200A
    Protein Accession:
    Secondary Accessions:
    • A4D293
    • A8K3V9
    • B2RD92
    • C9J6A8
    • D6W5T2
    • Q8N9P3

    Protein attributes for FAM200A Gene

    573 amino acids
    Molecular mass:
    66276 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM200A Gene

Proteomics data for FAM200A Gene at MOPED

Post-translational modifications for FAM200A Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for FAM200A Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for FAM200A Gene

Domains & Families for FAM200A Gene

Protein Domains for FAM200A Gene


Suggested Antigen Peptide Sequences for FAM200A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the FAM200 family.
  • Belongs to the FAM200 family.
genes like me logo Genes that share domains with FAM200A: view

No data available for Gene Families for FAM200A Gene

Function for FAM200A Gene

Gene Ontology (GO) - Molecular Function for FAM200A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA --
genes like me logo Genes that share ontologies with FAM200A: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM200A Gene

Localization for FAM200A Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM200A Gene

Membrane; Single-pass membrane protein.

Subcellular locations from

Jensen Localization Image for FAM200A Gene COMPARTMENTS Subcellular localization image for FAM200A gene
Compartment Confidence
cytosol 1
nucleus 1

Gene Ontology (GO) - Cellular Components for FAM200A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IBA --
genes like me logo Genes that share ontologies with FAM200A: view

Pathways & Interactions for FAM200A Gene

SuperPathways for FAM200A Gene

No Data Available

Interacting Proteins for FAM200A Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
Selected Interacting proteins: ENSP00000411372 Q8TCP9-F200A_HUMAN for FAM200A Gene via STRING UniProtKB

Gene Ontology (GO) - Biological Process for FAM200A Gene


No data available for Pathways by source and SIGNOR curated interactions for FAM200A Gene

Drugs & Compounds for FAM200A Gene

No Compound Related Data Available

Transcripts for FAM200A Gene

mRNA/cDNA for FAM200A Gene

Unigene Clusters for FAM200A Gene

Family with sequence similarity 200, member A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM200A Gene

No ASD Table

Relevant External Links for FAM200A Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for FAM200A Gene

mRNA expression in normal human tissues for FAM200A Gene

Protein differential expression in normal tissues from HIPED for FAM200A Gene

This gene is overexpressed in Platelet (28.7), Fetal testis (18.1), Fetal heart (14.8), and Liver (7.4).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FAM200A Gene

SOURCE GeneReport for Unigene cluster for FAM200A Gene Hs.596587

genes like me logo Genes that share expression patterns with FAM200A: view

Protein tissue co-expression partners for FAM200A Gene

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM200A Gene

Orthologs for FAM200A Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM200A Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia FAM200A 35
  • 88.37 (n)
  • 88.13 (a)
(Canis familiaris)
Mammalia FAM200A 35
  • 89.71 (n)
  • 90.07 (a)
FAM200A 36
  • 90 (a)
(Pan troglodytes)
Mammalia FAM200A 35
  • 99.36 (n)
  • 99.3 (a)
FAM200A 36
  • 99 (a)
(Mus musculus)
Mammalia 2410018M08Rik 36
  • 25 (a)
(Anolis carolinensis)
Reptilia -- 36
  • 24 (a)
(Danio rerio)
Actinopterygii CR388095.1 36
  • 31 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 22 (a)
Species with no ortholog for FAM200A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for FAM200A Gene

Gene Tree for FAM200A (if available)
Gene Tree for FAM200A (if available)

Paralogs for FAM200A Gene

Paralogs for FAM200A Gene

(5) SIMAP similar genes for FAM200A Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with FAM200A: view

Variants for FAM200A Gene

Sequence variations from dbSNP and Humsavar for FAM200A Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1273681 -- 99,550,119(-) aaaaa(A/G)GGGGG intron-variant, upstream-variant-2KB
rs6961540 -- 99,549,491(+) tgtgg(C/T)gattc intron-variant, upstream-variant-2KB
rs7794068 -- 99,549,250(+) gatcc(A/T)tgaat intron-variant
rs2404491 -- 99,545,842(+) tcttc(A/C)aaaaa downstream-variant-500B
rs35538664 -- 99,548,853(+) CCAAC(-/T)TCTAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM200A Gene

Variant ID Type Subtype PubMed ID
esv2507396 CNV Insertion 19546169

Variation tolerance for FAM200A Gene

Gene Damage Index Score: 2.55; 44.36% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for FAM200A Gene

Disorders for FAM200A Gene

Relevant External Links for FAM200A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for FAM200A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM200A Gene

Publications for FAM200A Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 67
  2. Interspersed repeats and other mementos of transposable elements in mammalian genomes. (PMID: 10607616) Smit A.F.A. (Curr. Opin. Genet. Dev. 1999) 2 3
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  4. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3
  5. Sequence diversity and haplotype structure at the human CYP3A cluster. (PMID: 16314882) Thompson E.E. … Di Rienzo A. (Pharmacogenomics J. 2006) 3

Products for FAM200A Gene

Sources for FAM200A Gene