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Aliases for FAM197Y5P Gene

Aliases for FAM197Y5P Gene

  • Family With Sequence Similarity 197 Y-Linked Member 5, Pseudogene 2 3 5
  • Family With Sequence Similarity 197, Y-Linked, Member 5, Pseudogene 2 3
  • Family With Sequence Similarity 197, Y-Linked, Member 5 2
  • FAM197Y5 3

External Ids for FAM197Y5P Gene

Previous HGNC Symbols for FAM197Y5P Gene

  • FAM197Y5

Summaries for FAM197Y5P Gene

GeneCards Summary for FAM197Y5P Gene

FAM197Y5P (Family With Sequence Similarity 197 Y-Linked Member 5, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM197Y5P Gene

Genomics for FAM197Y5P Gene

Genomic Location for FAM197Y5P Gene

Chromosome:
Y
Start:
9,458,613 bp from pter
End:
9,465,974 bp from pter
Size:
7,362 bases
Orientation:
Minus strand

Genomic View for FAM197Y5P Gene

Genes around FAM197Y5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM197Y5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM197Y5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM197Y5P Gene

No data available for Regulatory Elements for FAM197Y5P Gene

Proteins for FAM197Y5P Gene

Post-translational modifications for FAM197Y5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM197Y5P Gene

Domains & Families for FAM197Y5P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM197Y5P Gene

Function for FAM197Y5P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM197Y5P Gene

Localization for FAM197Y5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM197Y5P Gene

Pathways & Interactions for FAM197Y5P Gene

SuperPathways for FAM197Y5P Gene

No Data Available

Interacting Proteins for FAM197Y5P Gene

Gene Ontology (GO) - Biological Process for FAM197Y5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM197Y5P Gene

Drugs & Compounds for FAM197Y5P Gene

No Compound Related Data Available

Transcripts for FAM197Y5P Gene

mRNA/cDNA for FAM197Y5P Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM197Y5P Gene

No ASD Table

Relevant External Links for FAM197Y5P Gene

GeneLoc Exon Structure for
FAM197Y5P
ECgene alternative splicing isoforms for
FAM197Y5P

Expression for FAM197Y5P Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for FAM197Y5P Gene

Orthologs for FAM197Y5P Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for FAM197Y5P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 88 (a)
OneToOne
Species with no ortholog for FAM197Y5P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM197Y5P Gene

ENSEMBL:
Gene Tree for FAM197Y5P (if available)
TreeFam:
Gene Tree for FAM197Y5P (if available)

Paralogs for FAM197Y5P Gene

genes like me logo Genes that share paralogs with FAM197Y5P: view

No data available for Paralogs for FAM197Y5P Gene

Variants for FAM197Y5P Gene

Sequence variations from dbSNP and Humsavar for FAM197Y5P Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type
rs4007957 -- 9,458,755(-) atctc(A/G)gctca nc-transcript-variant
rs368902116 -- 9,462,573(+) AAATT(C/G)ATAAG intron-variant
rs369697287 -- 9,458,464(+) CATGA(C/G)TGAAA downstream-variant-500B
rs373153581 -- 9,462,707(+) CAAAA(C/G)AAGAA intron-variant
rs373508760 -- 9,462,554(+) ACACA(A/C)ACACA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for FAM197Y5P Gene

Disorders for FAM197Y5P Gene

Relevant External Links for FAM197Y5P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM197Y5P
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM197Y5P

No disorders were found for FAM197Y5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM197Y5P Gene

Publications for FAM197Y5P Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3 67
  2. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3

Products for FAM197Y5P Gene

Sources for FAM197Y5P Gene

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