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Aliases for FAM197Y5 Gene

Aliases for FAM197Y5 Gene

  • Family With Sequence Similarity 197, Y-Linked, Member 5, Pseudogene 2 3
  • Family With Sequence Similarity 197, Y-Linked, Member 5 2

External Ids for FAM197Y5 Gene

Previous GeneCards Identifiers for FAM197Y5 Gene

  • GC00U929958
  • GC0YM009300

Summaries for FAM197Y5 Gene

GeneCards Summary for FAM197Y5 Gene

FAM197Y5 (Family With Sequence Similarity 197, Y-Linked, Member 5, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM197Y5 Gene

Genomics for FAM197Y5 Gene

Genomic Location for FAM197Y5 Gene

Start:
9,458,613 bp from pter
End:
9,465,974 bp from pter
Size:
7,362 bases
Orientation:
Minus strand

Genomic View for FAM197Y5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM197Y5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM197Y5 Gene

No data available for Regulatory Elements for FAM197Y5 Gene

Proteins for FAM197Y5 Gene

Post-translational modifications for FAM197Y5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM197Y5 Gene

Domains for FAM197Y5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM197Y5 Gene

Function for FAM197Y5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for FAM197Y5 Gene

Localization for FAM197Y5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM197Y5 Gene

Pathways for FAM197Y5 Gene

SuperPathways for FAM197Y5 Gene

No Data Available

Interacting Proteins for FAM197Y5 Gene

Gene Ontology (GO) - Biological Process for FAM197Y5 Gene

None

No data available for Pathways by source for FAM197Y5 Gene

Transcripts for FAM197Y5 Gene

mRNA/cDNA for FAM197Y5 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for FAM197Y5

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for FAM197Y5 Gene

No ASD Table

Relevant External Links for FAM197Y5 Gene

GeneLoc Exon Structure for
FAM197Y5
ECgene alternative splicing isoforms for
FAM197Y5

Expression for FAM197Y5 Gene

mRNA expression in normal human tissues for FAM197Y5 Gene

genes like me logo Genes that share expressions with FAM197Y5: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for FAM197Y5 Gene

Orthologs for FAM197Y5 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for FAM197Y5 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 88 (a)
OneToOne
Species with no ortholog for FAM197Y5:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM197Y5 Gene

ENSEMBL:
Gene Tree for FAM197Y5 (if available)
TreeFam:
Gene Tree for FAM197Y5 (if available)

Paralogs for FAM197Y5 Gene

genes like me logo Genes that share paralogs with FAM197Y5: view

No data available for Paralogs for FAM197Y5 Gene

Variants for FAM197Y5 Gene

Sequence variations from dbSNP and Humsavar for FAM197Y5 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type MAF
rs4007957 -- 9,458,755(-) atctc(A/G)gctca nc-transcript-variant
rs368902116 -- 9,462,573(+) AAATT(C/G)ATAAG intron-variant
rs369697287 -- 9,458,464(+) CATGA(C/G)TGAAA downstream-variant-500B
rs373153581 -- 9,462,707(+) CAAAA(C/G)AAGAA intron-variant
rs373508760 -- 9,462,554(+) ACACA(A/C)ACACA intron-variant

Relevant External Links for FAM197Y5 Gene

HapMap Linkage Disequilibrium report
FAM197Y5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM197Y5 Gene

Disorders for FAM197Y5 Gene

No disorders were found for FAM197Y5 Gene.

No data available for UniProtKB/Swiss-Prot for FAM197Y5 Gene

Publications for FAM197Y5 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3
  2. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3

Products for FAM197Y5 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate FAM197Y5
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for FAM197Y5
    • Block miRNA regulation of FAM197Y5 using miScript Target Protectors

    Sources for FAM197Y5 Gene

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