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Aliases for FAM197Y2 Gene

Subcategory (RNA class) for FAM197Y2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for FAM197Y2 Gene

  • Family With Sequence Similarity 197 Y-Linked Member 2 2 3 5
  • Family With Sequence Similarity 197 Y-Linked Member 2, Pseudogene 2 3
  • Family With Sequence Similarity 197, Y-Linked, Member 2, Pseudogene 2
  • Chromosome Y Open Reading Frame 16 2
  • FAM197Y2P 3
  • CYorf16 3

External Ids for FAM197Y2 Gene

Previous HGNC Symbols for FAM197Y2 Gene

  • CYorf16
  • FAM197Y2P

Previous GeneCards Identifiers for FAM197Y2 Gene

  • GC0YM009968
  • GC0YM009359

Summaries for FAM197Y2 Gene

GeneCards Summary for FAM197Y2 Gene

FAM197Y2 (Family With Sequence Similarity 197 Y-Linked Member 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM197Y2 Gene

Genomics for FAM197Y2 Gene

Genomic Location for FAM197Y2 Gene

Chromosome:
Y
Start:
9,517,599 bp from pter
End:
9,526,897 bp from pter
Size:
9,299 bases
Orientation:
Minus strand

Genomic View for FAM197Y2 Gene

Genes around FAM197Y2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM197Y2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM197Y2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM197Y2 Gene

No data available for Regulatory Elements for FAM197Y2 Gene

Proteins for FAM197Y2 Gene

Post-translational modifications for FAM197Y2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM197Y2 Gene

Domains & Families for FAM197Y2 Gene

Suggested Antigen Peptide Sequences for FAM197Y2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for FAM197Y2 Gene

Function for FAM197Y2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM197Y2 Gene

Localization for FAM197Y2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM197Y2 Gene

Pathways & Interactions for FAM197Y2 Gene

SuperPathways for FAM197Y2 Gene

No Data Available

Interacting Proteins for FAM197Y2 Gene

Gene Ontology (GO) - Biological Process for FAM197Y2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM197Y2 Gene

Transcripts for FAM197Y2 Gene

mRNA/cDNA for FAM197Y2 Gene

(2) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM197Y2 Gene

No ASD Table

Relevant External Links for FAM197Y2 Gene

GeneLoc Exon Structure for
FAM197Y2
ECgene alternative splicing isoforms for
FAM197Y2

Expression for FAM197Y2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for FAM197Y2 Gene

NURSA nuclear receptor signaling pathways regulating expression of FAM197Y2 Gene:

FAM197Y2

SOURCE GeneReport for Unigene cluster for FAM197Y2 Gene:

Hs.559065
genes like me logo Genes that share expression patterns with FAM197Y2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for FAM197Y2 Gene

Orthologs for FAM197Y2 Gene

Evolution for FAM197Y2 Gene

ENSEMBL:
Gene Tree for FAM197Y2 (if available)
TreeFam:
Gene Tree for FAM197Y2 (if available)

No data available for Orthologs for FAM197Y2 Gene

Paralogs for FAM197Y2 Gene

No data available for Paralogs for FAM197Y2 Gene

Variants for FAM197Y2 Gene

Sequence variations from dbSNP and Humsavar for FAM197Y2 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type
rs111378692 -- 9,526,489(+) CTCCC(A/C)CCTGG upstream-variant-2KB
rs112699491 -- 9,521,720(+) CCACT(G/T)CATTC intron-variant
rs113166904 -- 9,523,647(+) TTAAC(A/G)CCCCC intron-variant
rs144794422 -- 9,525,743(+) GGTGG(A/G)CCCCG upstream-variant-2KB
rs148081755 -- 9,525,712(+) CAACG(-/C)GCACA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for FAM197Y2 Gene

Variant ID Type Subtype PubMed ID
nsv1077607 CNV duplication 25765185
nsv1077608 CNV duplication 25765185
nsv1115925 CNV duplication 24896259
nsv1115926 CNV duplication 24896259
nsv1149597 CNV duplication 26484159
nsv1151272 CNV duplication 26484159
nsv7473 OTHER inversion 18451855
nsv953732 CNV duplication 24416366
nsv953735 CNV duplication 24416366
nsv953737 CNV duplication 24416366

Relevant External Links for FAM197Y2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM197Y2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM197Y2 Gene

Disorders for FAM197Y2 Gene

Relevant External Links for FAM197Y2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM197Y2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM197Y2

No disorders were found for FAM197Y2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM197Y2 Gene

Publications for FAM197Y2 Gene

  1. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 3 64

Products for FAM197Y2 Gene

Sources for FAM197Y2 Gene

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