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Aliases for FAM192A Gene

Aliases for FAM192A Gene

  • Family With Sequence Similarity 192, Member A 2 3
  • NEFA-Interacting Nuclear Protein NIP30 3 4
  • C16orf94 3 4
  • NIP30 3 4
  • NEFA Interacting Nuclear Protein NIP30 2
  • Chromosome 16 Open Reading Frame 94 2
  • Protein FAM192A 3
  • CDA018 3
  • CDA10 3

External Ids for FAM192A Gene

Previous Symbols for FAM192A Gene

  • C16orf94

Summaries for FAM192A Gene

GeneCards Summary for FAM192A Gene

FAM192A (Family With Sequence Similarity 192, Member A) is a Protein Coding gene.

Gene Wiki entry for FAM192A Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM192A Gene

Genomics for FAM192A Gene

Genomic Location for FAM192A Gene

Start:
57,152,466 bp from pter
End:
57,186,153 bp from pter
Size:
33,688 bases
Orientation:
Minus strand

Genomic View for FAM192A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM192A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM192A Gene

No data available for Regulatory Elements for FAM192A Gene

Proteins for FAM192A Gene

  • Protein details for FAM192A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9GZU8-F192A_HUMAN
    Recommended name:
    Protein FAM192A
    Protein Accession:
    Q9GZU8
    Secondary Accessions:

    Protein attributes for FAM192A Gene

    Size:
    254 amino acids
    Molecular mass:
    28912 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM192A Gene

Proteomics data for FAM192A Gene at MOPED

Post-translational modifications for FAM192A Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys151

No data available for DME Specific Peptides for FAM192A Gene

Domains for FAM192A Gene

Protein Domains for FAM192A Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for FAM192A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with FAM192A: view

No data available for Gene Families and UniProtKB/Swiss-Prot for FAM192A Gene

Function for FAM192A Gene

Gene Ontology (GO) - Molecular Function for FAM192A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with FAM192A: view

miRNA for FAM192A Gene

miRTarBase miRNAs that target FAM192A

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for FAM192A Gene

Localization for FAM192A Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM192A Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM192A Gene COMPARTMENTS Subcellular localization image for FAM192A gene
Compartment Confidence
nucleus 4
cytosol 1

Gene Ontology (GO) - Cellular Components for FAM192A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA --
genes like me logo Genes that share ontologies with FAM192A: view

Pathways for FAM192A Gene

SuperPathways for FAM192A Gene

No Data Available

Gene Ontology (GO) - Biological Process for FAM192A Gene

None

No data available for Pathways by source for FAM192A Gene

Transcripts for FAM192A Gene

Unigene Clusters for FAM192A Gene

Family with sequence similarity 192, member A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for FAM192A Gene

ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9a · 9b ^ 10 ^ 11a · 11b ^ 12 ^ 13 ^ 14
SP1: - - - - -
SP2: - - - - -
SP3:
SP4: -
SP5: - -
SP6: -
SP7:

Relevant External Links for FAM192A Gene

GeneLoc Exon Structure for
FAM192A
ECgene alternative splicing isoforms for
FAM192A

Expression for FAM192A Gene

mRNA expression in normal human tissues for FAM192A Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for FAM192A Gene

SOURCE GeneReport for Unigene cluster for FAM192A Gene Hs.396740

genes like me logo Genes that share expressions with FAM192A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM192A Gene

Orthologs for FAM192A Gene

This gene was present in the common ancestor of animals.

Orthologs for FAM192A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FAM192A 35
  • 99.48 (n)
  • 99.21 (a)
FAM192A 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia FAM192A 35
  • 92.23 (n)
  • 95.26 (a)
NIP30 36
  • 96 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM192A 35
  • 91.6 (n)
  • 94.09 (a)
FAM192A 36
  • 94 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fam192a 35
  • 88.54 (n)
  • 93.28 (a)
Fam192a 16
Fam192a 36
  • 93 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia FAM192A 36
  • 85 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia FAM192A 36
  • 83 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Nip30 35
  • 88.8 (n)
  • 93.28 (a)
chicken
(Gallus gallus)
Aves FAM192A 35
  • 77.03 (n)
  • 77.95 (a)
FAM192A 36
  • 78 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia FAM192A 36
  • 77 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia nip30-prov 35
tropical clawed frog
(Silurana tropicalis)
Amphibia fam192a 35
  • 65.61 (n)
  • 66.27 (a)
Str.11948 35
zebrafish
(Danio rerio)
Actinopterygii fam192a 35
  • 65.37 (n)
  • 63.41 (a)
fam192a 36
  • 61 (a)
OneToOne
wufa02g12 35
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP010768 35
  • 52 (n)
  • 46 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG14480 35
  • 49.35 (n)
  • 41.67 (a)
CG14480 36
  • 39 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea C25A1.1 36
  • 37 (a)
OneToOne
Species with no ortholog for FAM192A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for FAM192A Gene

ENSEMBL:
Gene Tree for FAM192A (if available)
TreeFam:
Gene Tree for FAM192A (if available)

Paralogs for FAM192A Gene

Pseudogenes.org Pseudogenes for FAM192A Gene

genes like me logo Genes that share paralogs with FAM192A: view

No data available for Paralogs for FAM192A Gene

Variants for FAM192A Gene

Sequence variations from dbSNP and Humsavar for FAM192A Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs15243 -- 57,153,654(+) GGTTG(G/T)AGAGA utr-variant-3-prime
rs767505 -- 57,178,738(+) TTTCA(A/G)AAATA intron-variant, utr-variant-5-prime
rs933716 -- 57,158,237(-) TATAC(A/G)TAAGT intron-variant
rs1423936 -- 57,179,458(+) GGGTG(A/G)TGGGA intron-variant
rs1833992 -- 57,179,310(+) ACTTA(G/T)AGTCC intron-variant

Relevant External Links for FAM192A Gene

HapMap Linkage Disequilibrium report
FAM192A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for FAM192A Gene

Disorders for FAM192A Gene

No disorders were found for FAM192A Gene.

No data available for UniProtKB/Swiss-Prot for FAM192A Gene

Publications for FAM192A Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. From ORFeome to biology: a functional genomics pipeline. (PMID: 15489336) Wiemann S. … Poustka A. (Genome Res. 2004) 3
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for FAM192A Gene

  • antibodies-online proteins for FAM192A
  • antibodies-online antibodies for FAM192A
  • antibodies-online kits for FAM192A

Sources for FAM192A Gene

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