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Aliases for FAM187A Gene

Aliases for FAM187A Gene

  • Family With Sequence Similarity 187, Member A 2 3

External Ids for FAM187A Gene

Summaries for FAM187A Gene

GeneCards Summary for FAM187A Gene

FAM187A (Family With Sequence Similarity 187, Member A) is a Protein Coding gene. An important paralog of this gene is FAM187B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM187A Gene

Genomics for FAM187A Gene

Genomic Location for FAM187A Gene

Start:
44,899,712 bp from pter
End:
44,905,390 bp from pter
Size:
5,679 bases
Orientation:
Plus strand

Genomic View for FAM187A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for FAM187A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence and Regulatory Elements for FAM187A Gene

Proteins for FAM187A Gene

  • Protein details for FAM187A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NFU0-F187A_HUMAN
    Recommended name:
    Ig-like V-type domain-containing protein FAM187A
    Protein Accession:
    A6NFU0
    Secondary Accessions:

    Protein attributes for FAM187A Gene

    Size:
    413 amino acids
    Molecular mass:
    47349 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM187A Gene

Proteomics data for FAM187A Gene at MOPED

Post-translational modifications for FAM187A Gene

Other Protein References for FAM187A Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for FAM187A Gene

Domains for FAM187A Gene

Gene Families for FAM187A Gene

HGNC:
  • VSET :Immunoglobulin superfamily / V-set domain containing

Protein Domains for FAM187A Gene

UniProtKB/Swiss-Prot:

F187A_HUMAN
Domain:
  • Contains 1 Ig-like V-type (immunoglobulin-like) domain.:
    • A6NFU0
Family:
  • Belongs to the FAM187 family.:
    • A6NFU0
genes like me logo Genes that share domains with FAM187A: view

Function for FAM187A Gene

Gene Ontology (GO) - Molecular Function for FAM187A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
GO:0042803 protein homodimerization activity --
genes like me logo Genes that share ontologies with FAM187A: view

miRNA for FAM187A Gene

miRTarBase miRNAs that target FAM187A

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for FAM187A Gene

Localization for FAM187A Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM187A Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM187A Gene COMPARTMENTS Subcellular localization image for FAM187A gene
Compartment Confidence
extracellular 2
plasma membrane 2
cytosol 1
lysosome 1
mitochondrion 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for FAM187A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm --
GO:0005930 axoneme --
GO:0016021 integral component of membrane IEA --
GO:0031514 motile cilium --
genes like me logo Genes that share ontologies with FAM187A: view

Pathways for FAM187A Gene

SuperPathways for FAM187A Gene

No Data Available

Interacting Proteins for FAM187A Gene

Gene Ontology (GO) - Biological Process for FAM187A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001947 heart looping --
GO:0003341 cilium movement --
GO:0030030 cell projection organization --
GO:0036158 outer dynein arm assembly --
GO:0036159 inner dynein arm assembly --
genes like me logo Genes that share ontologies with FAM187A: view

No data available for Pathways by source for FAM187A Gene

Transcripts for FAM187A Gene

mRNA/cDNA for FAM187A Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM187A Gene

No ASD Table

Relevant External Links for FAM187A Gene

GeneLoc Exon Structure for
FAM187A
ECgene alternative splicing isoforms for
FAM187A

Expression for FAM187A Gene

mRNA expression in normal human tissues for FAM187A Gene

mRNA expression in normal human tissues for FAM187A Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for FAM187A Gene

genes like me logo Genes that share expressions with FAM187A: view

Orthologs for FAM187A Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM187A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia FAM187A 37
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia FAM187A 37
  • 84 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM187A 37
  • 84 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fam187a 16
Fam187a 37
  • 78 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia FAM187A 37
  • 69 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia FAM187A 37
  • 67 (a)
OneToOne
chicken
(Gallus gallus)
Aves FAM187A 37
  • 54 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia FAM187A 37
  • 56 (a)
OneToOne
Species with no ortholog for FAM187A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM187A Gene

ENSEMBL:
Gene Tree for FAM187A (if available)
TreeFam:
Gene Tree for FAM187A (if available)

Paralogs for FAM187A Gene

Paralogs for FAM187A Gene

genes like me logo Genes that share paralogs with FAM187A: view

Variants for FAM187A Gene

Relevant External Links for FAM187A Gene

HapMap Linkage Disequilibrium report
FAM187A

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for FAM187A Gene

Disorders for FAM187A Gene

No disorders were found for FAM187A Gene.

No data available for UniProtKB/Swiss-Prot for FAM187A Gene

Publications for FAM187A Gene

  1. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for FAM187A Gene

Sources for FAM187A Gene

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