Free for academic non-profit institutions. Other users need a Commercial license

Aliases for FAM187A Gene

Aliases for FAM187A Gene

  • Family With Sequence Similarity 187 Member A 2 3 5
  • Family With Sequence Similarity 187, Member A 2

External Ids for FAM187A Gene

Previous GeneCards Identifiers for FAM187A Gene

  • GC00U922894
  • GC17P042979

Summaries for FAM187A Gene

GeneCards Summary for FAM187A Gene

FAM187A (Family With Sequence Similarity 187 Member A) is a Protein Coding gene. GO annotations related to this gene include protein homodimerization activity. An important paralog of this gene is CCDC103.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM187A Gene

Genomics for FAM187A Gene

Regulatory Elements for FAM187A Gene

Enhancers for FAM187A Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around FAM187A on UCSC Golden Path with GeneCards custom track

Promoters for FAM187A Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around FAM187A on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM187A Gene

Chromosome:
17
Start:
44,899,712 bp from pter
End:
44,905,390 bp from pter
Size:
5,679 bases
Orientation:
Plus strand

Genomic View for FAM187A Gene

Genes around FAM187A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM187A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM187A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for FAM187A Gene

Proteins for FAM187A Gene

  • Protein details for FAM187A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NFU0-F187A_HUMAN
    Recommended name:
    Ig-like V-type domain-containing protein FAM187A
    Protein Accession:
    A6NFU0

    Protein attributes for FAM187A Gene

    Size:
    413 amino acids
    Molecular mass:
    47349 Da
    Quaternary structure:
    No Data Available

neXtProt entry for FAM187A Gene

Proteomics data for FAM187A Gene at MOPED

Post-translational modifications for FAM187A Gene

No Post-translational modifications

Other Protein References for FAM187A Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for FAM187A Gene

Domains & Families for FAM187A Gene

Gene Families for FAM187A Gene

Protein Domains for FAM187A Gene

Suggested Antigen Peptide Sequences for FAM187A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A6NFU0

UniProtKB/Swiss-Prot:

F187A_HUMAN :
  • Contains 1 Ig-like V-type (immunoglobulin-like) domain.
  • Belongs to the FAM187 family.
Domain:
  • Contains 1 Ig-like V-type (immunoglobulin-like) domain.
Family:
  • Belongs to the FAM187 family.
genes like me logo Genes that share domains with FAM187A: view

Function for FAM187A Gene

miRNA for FAM187A Gene

miRTarBase miRNAs that target FAM187A

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for FAM187A Gene

Localization for FAM187A Gene

Subcellular locations from UniProtKB/Swiss-Prot for FAM187A Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for FAM187A Gene COMPARTMENTS Subcellular localization image for FAM187A gene
Compartment Confidence
cytosol 2

No data available for Gene Ontology (GO) - Cellular Components for FAM187A Gene

Pathways & Interactions for FAM187A Gene

SuperPathways for FAM187A Gene

No Data Available

Interacting Proteins for FAM187A Gene

Gene Ontology (GO) - Biological Process for FAM187A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM187A Gene

Drugs & Compounds for FAM187A Gene

No Compound Related Data Available

Transcripts for FAM187A Gene

mRNA/cDNA for FAM187A Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM187A Gene

No ASD Table

Relevant External Links for FAM187A Gene

GeneLoc Exon Structure for
FAM187A
ECgene alternative splicing isoforms for
FAM187A

Expression for FAM187A Gene

mRNA expression in normal human tissues for FAM187A Gene

mRNA expression in normal human tissues for FAM187A Gene

Protein differential expression in normal tissues from HIPED for FAM187A Gene

This gene is overexpressed in Platelet (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for FAM187A Gene



genes like me logo Genes that share expression patterns with FAM187A: view

Protein tissue co-expression partners for FAM187A Gene

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for FAM187A Gene

Orthologs for FAM187A Gene

This gene was present in the common ancestor of chordates.

Orthologs for FAM187A Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia FAM187A 36
  • 84 (a)
OneToOne
dog
(Canis familiaris)
Mammalia FAM187A 36
  • 84 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia FAM187A 36
  • 69 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Fam187a 36
  • 78 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia FAM187A 36
  • 67 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia FAM187A 36
  • 97 (a)
OneToOne
chicken
(Gallus gallus)
Aves FAM187A 36
  • 54 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia FAM187A 36
  • 56 (a)
OneToOne
Species with no ortholog for FAM187A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for FAM187A Gene

ENSEMBL:
Gene Tree for FAM187A (if available)
TreeFam:
Gene Tree for FAM187A (if available)

Paralogs for FAM187A Gene

Paralogs for FAM187A Gene

genes like me logo Genes that share paralogs with FAM187A: view

Variants for FAM187A Gene

Variation tolerance for FAM187A Gene

Gene Damage Index Score: 10.08; 90.17% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for FAM187A Gene

Disorders for FAM187A Gene

Relevant External Links for FAM187A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM187A

No disorders were found for FAM187A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM187A Gene

Publications for FAM187A Gene

  1. DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage. (PMID: 16625196) Zody M.C. … Nusbaum C. (Nature 2006) 3 4 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for FAM187A Gene

Sources for FAM187A Gene

Content