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Aliases for FAM183CP Gene

Aliases for FAM183CP Gene

  • Family With Sequence Similarity 183 Member C, Pseudogene 2 3 5
  • Family With Sequence Similarity 183, Member C, Pseudogene 2

External Ids for FAM183CP Gene

Previous GeneCards Identifiers for FAM183CP Gene

  • GC08P029781

Summaries for FAM183CP Gene

GeneCards Summary for FAM183CP Gene

FAM183CP (Family With Sequence Similarity 183 Member C, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for FAM183CP Gene

Genomics for FAM183CP Gene

Regulatory Elements for FAM183CP Gene

Enhancers for FAM183CP Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F029818 0.2 ENCODE 16.3 -102.3 -102292 2.1 ZNF133 YBX1 ZNF2 ZEB1 ZNF23 KLF7 ZNF548 FOS EGR2 ZNF362 ENSG00000259366 GTF2E2 LOC105379354 FAM183CP TAGLN2P2 GC08P029814 LOC101929470
GH08F030079 0.5 ENCODE 16.2 +160.8 160811 5.0 HDGF PKNOX1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 LEPROTL1 WRN SARAF TAGLN2P2 FAM183CP LOC105379354 GTF2E2 ENSG00000272256 RNU6-1218P
GH08F029124 0.8 Ensembl ENCODE 16.2 -795.5 -795463 2.5 PKNOX1 FEZF1 ZNF2 ZNF121 FOS KLF7 SP3 TSHZ1 ZNF488 ZNF518A FAM183CP LOC105379354 ENSG00000259366 GC08P029142 LOC105379348
GH08F029919 0.7 ENCODE 0.8 -1.0 -954 1.6 JUN MAX RAD21 RFX5 GTF3C2 POLR3A SMC3 RCOR1 MAFK TCF7L2 ENSG00000259366 GTF2E2 FAM183CP ENSG00000253604
GH08F029925 0.9 Ensembl ENCODE 0.4 +5.1 5064 1.7 JUN THRB RAD21 CTBP1 GATA3 FOS RCOR1 CHD2 NR2F1 CEBPB FAM183CP MIR3148
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around FAM183CP on UCSC Golden Path with GeneCards custom track

Genomic Location for FAM183CP Gene

Chromosome:
8
Start:
29,921,513 bp from pter
End:
29,953,724 bp from pter
Size:
32,212 bases
Orientation:
Plus strand

Genomic View for FAM183CP Gene

Genes around FAM183CP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
FAM183CP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for FAM183CP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for FAM183CP Gene

Proteins for FAM183CP Gene

Post-translational modifications for FAM183CP Gene

No Post-translational modifications

No data available for DME Specific Peptides for FAM183CP Gene

Domains & Families for FAM183CP Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for FAM183CP Gene

Function for FAM183CP Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for FAM183CP Gene

Localization for FAM183CP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for FAM183CP Gene

Pathways & Interactions for FAM183CP Gene

SuperPathways for FAM183CP Gene

No Data Available

Interacting Proteins for FAM183CP Gene

Gene Ontology (GO) - Biological Process for FAM183CP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for FAM183CP Gene

Transcripts for FAM183CP Gene

mRNA/cDNA for FAM183CP Gene

(5) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for FAM183CP Gene

No ASD Table

Relevant External Links for FAM183CP Gene

GeneLoc Exon Structure for
FAM183CP
ECgene alternative splicing isoforms for
FAM183CP

Expression for FAM183CP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for FAM183CP Gene

mRNA differential expression in normal tissues according to GTEx for FAM183CP Gene

This gene is overexpressed in Testis (x52.3).

NURSA nuclear receptor signaling pathways regulating expression of FAM183CP Gene:

FAM183CP
genes like me logo Genes that share expression patterns with FAM183CP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for FAM183CP Gene

Orthologs for FAM183CP Gene

Evolution for FAM183CP Gene

ENSEMBL:
Gene Tree for FAM183CP (if available)
TreeFam:
Gene Tree for FAM183CP (if available)

No data available for Orthologs for FAM183CP Gene

Paralogs for FAM183CP Gene

No data available for Paralogs for FAM183CP Gene

Variants for FAM183CP Gene

Sequence variations from dbSNP and Humsavar for FAM183CP Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs10101117 -- 29,945,211(+) TACAA(G/T)ATGTT intron-variant
rs10503857 -- 29,932,192(+) GTGAC(A/G)TATCT intron-variant
rs10503858 -- 29,934,589(+) ATACA(C/T)TGCCA intron-variant
rs10503859 -- 29,937,309(+) catct(C/G)tttgt intron-variant
rs111264780 -- 29,940,215(+) GCTTC(G/T)ATTGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for FAM183CP Gene

Variant ID Type Subtype PubMed ID
esv3616779 CNV loss 21293372

Relevant External Links for FAM183CP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
FAM183CP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for FAM183CP Gene

Disorders for FAM183CP Gene

Relevant External Links for FAM183CP

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
FAM183CP

No disorders were found for FAM183CP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for FAM183CP Gene

Publications for FAM183CP Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64

Products for FAM183CP Gene

Sources for FAM183CP Gene

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